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Aliases for MIR3943 Gene

Subcategory (RNA class) for MIR3943 Gene


Quality Score for this RNA gene is


Aliases for MIR3943 Gene

  • MicroRNA 3943 2 3 5
  • Hsa-Mir-3943 3

External Ids for MIR3943 Gene

Previous GeneCards Identifiers for MIR3943 Gene

  • GC07U903115
  • GC07P043192

Summaries for MIR3943 Gene

Entrez Gene Summary for MIR3943 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3943 Gene

MIR3943 (MicroRNA 3943) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR3943 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3943 Gene

Genomics for MIR3943 Gene

GeneHancer (GH) Regulatory Elements for MIR3943 Gene

Promoters and enhancers for MIR3943 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I043138 Enhancer 0.6 ENCODE 0.4 -10.8 -10793 3.9 RNF2 BACH1 ZIC2 SP1 SMARCA4 GLIS1 ZNF239 SCRT2 BCL6B CTBP2 HECW1-IT1 HECW1 RNU7-35P RNU6-575P ENSG00000228680 C7orf25 MIR3943
GH07I043135 Enhancer 0.5 ENCODE 0.4 -15.6 -15551 0.6 SP1 JUND ZNF512 FOS HECW1 RNU7-35P HECW1-IT1 MIR3943
GH07I043119 Enhancer 0.5 ENCODE 0.3 -31.3 -31301 1 JUND IKZF1 CREB1 FOS HECW1-IT1 ENSG00000228680 RNU7-35P HECW1 MIR3943
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR3943 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR3943 Gene

Genomic Locations for MIR3943 Gene
100 bases
Plus strand

Genomic View for MIR3943 Gene

Genes around MIR3943 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3943 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3943 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3943 Gene

Proteins for MIR3943 Gene

Post-translational modifications for MIR3943 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3943 Gene

Domains & Families for MIR3943 Gene

Gene Families for MIR3943 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3943: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3943 Gene

Function for MIR3943 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3943 Gene

Localization for MIR3943 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3943 Gene

Pathways & Interactions for MIR3943 Gene

SuperPathways for MIR3943 Gene

No Data Available

Interacting Proteins for MIR3943 Gene

Gene Ontology (GO) - Biological Process for MIR3943 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR3943 Gene

Drugs & Compounds for MIR3943 Gene

No Compound Related Data Available

Transcripts for MIR3943 Gene

mRNA/cDNA for MIR3943 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3943 Gene

No ASD Table

Relevant External Links for MIR3943 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR3943 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR3943 Gene

mRNA differential expression in normal tissues according to GTEx for MIR3943 Gene

This gene is overexpressed in Testis (x53.0).

NURSA nuclear receptor signaling pathways regulating expression of MIR3943 Gene:

genes like me logo Genes that share expression patterns with MIR3943: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3943 Gene

Orthologs for MIR3943 Gene

Evolution for MIR3943 Gene

Gene Tree for MIR3943 (if available)
Gene Tree for MIR3943 (if available)

No data available for Orthologs for MIR3943 Gene

Paralogs for MIR3943 Gene

No data available for Paralogs for MIR3943 Gene

Variants for MIR3943 Gene

Sequence variations from dbSNP and Humsavar for MIR3943 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000275187 -- 43,149,147(+) C/A upstream_transcript_variant
rs1000306221 -- 43,149,429(+) A/C/G upstream_transcript_variant
rs1000865335 -- 43,149,832(+) A/T upstream_transcript_variant
rs1001949277 -- 43,150,623(+) C/T upstream_transcript_variant
rs1006128470 -- 43,150,870(+) T/C upstream_transcript_variant

Additional Variant Information for MIR3943 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR3943 Gene

Disorders for MIR3943 Gene

Additional Disease Information for MIR3943

No disorders were found for MIR3943 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3943 Gene

Publications for MIR3943 Gene

  1. Deep sequencing of human nuclear and cytoplasmic small RNAs reveals an unexpectedly complex subcellular distribution of miRNAs and tRNA 3' trailers. (PMID: 20498841) Liao JY … Qu LH (PloS one 2010) 3 58
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR3943 Gene

Sources for MIR3943 Gene

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