microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The ... See more...

Aliases for MIR3937 Gene

Subcategory (RNA class) for MIR3937 Gene

miRNA

Number of RNA Genes sources:

1 / 17

Aliases for MIR3937 Gene

  • MicroRNA 3937 2 3 5
  • Hsa-Mir-3937 2 3
  • MIR3937 2 5
  • MIMAT0018352 50
  • MI0016593 50

External Ids for MIR3937 Gene

Previous GeneCards Identifiers for MIR3937 Gene

  • GC0XU901673
  • GC0XP039522

Summaries for MIR3937 Gene

Entrez Gene Summary for MIR3937 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3937 Gene

MIR3937 (MicroRNA 3937) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR3937 Gene

No data available for CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MIR3937 Gene

Genomics for MIR3937 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for MIR3937 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ039687 Promoter/Enhancer 1.4 ENCODE CraniofacialAtlas 0.3 +27.4 27423 3 RNF2 HNRNPL ZIC2 PATZ1 ZNF740 ZNF501 EZH2 ZNF600 SOX6 ZNF341 piR-30853-082 MIR3937 LOC107985687 MID1IP1
GH0XJ039665 Enhancer 0.5 Ensembl 0.7 +4.9 4885 1 NFE2 MAFG FOSL2 EMSY MAFK MIR3937 lnc-MID1IP1-9 piR-30853-082 LOC107985687 MID1IP1
GH0XJ039692 Enhancer 0.9 Ensembl 0.3 +31.9 31907 1 CREB1 ATF7 ZNF629 LEF1 IKZF1 JUND PRDM1 PKNOX1 MTA1 DPF2 piR-30853-082 MIR3937 LOC107985687 MID1IP1
GH0XJ039653 Enhancer 0.4 ENCODE 0.4 -7.1 -7137 2 TEAD4 RFX1 BMI1 TAF1 lnc-MID1IP1-9 MIR3937 LOC107985687 MID1IP1
GH0XJ039677 Enhancer 0.4 Ensembl 0.4 +17.1 17085 1 SP1 NR2F2 RXRA HNF4A MIR3937 piR-30853-082 lnc-MID1IP1-9 LOC107985687 MID1IP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR3937 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for MIR3937 Gene

Genomic Locations for MIR3937 Gene
chrX:39,661,216-39,661,321
(GRCh38/hg38)
Size:
106 bases
Orientation:
Plus strand
chrX:39,520,470-39,520,575
(GRCh37/hg19)
Size:
106 bases
Orientation:
Plus strand

Genomic View for MIR3937 Gene

Genes around MIR3937 on UCSC Golden Path with GeneCards custom track
MIR3937 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
MIR3937 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3937 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3937 Gene

Proteins for MIR3937 Gene

Post-translational modifications for MIR3937 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3937 Gene

Domains & Families for MIR3937 Gene

Gene Families for MIR3937 Gene

HGNC:
genes like me logo Genes that share domains with MIR3937: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MIR3937 Gene

Function for MIR3937 Gene

Phenotypes From GWAS Catalog for MIR3937 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3937 Gene

Localization for MIR3937 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3937 Gene

Pathways & Interactions for MIR3937 Gene

PathCards logo

SuperPathways for MIR3937 Gene

No Data Available

Gene Ontology (GO) - Biological Process for MIR3937 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MIR3937 Gene

Drugs & Compounds for MIR3937 Gene

No Compound Related Data Available

Transcripts for MIR3937 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for MIR3937 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075E234_9606 precursor_RNA 106 4

HGNC: 38970,

RefSeq: NR_037501,

Ensembl: ENST00000580135 (view in UCSC) ,

miRBase: MI0016593,

URS000075BC71_9606 miRNA 23 2

RefSeq: NR_037501,

miRBase: MIMAT0018352,

MIR3937 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3937 Gene

No ASD Table

Relevant External Links for MIR3937 Gene

GeneLoc Exon Structure for
MIR3937

No data available for mRNA/cDNA for MIR3937 Gene

Expression for MIR3937 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR3937 Gene

genes like me logo Genes that share expression patterns with MIR3937: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3937 Gene

Orthologs for MIR3937 Gene

Evolution for MIR3937 Gene

ENSEMBL:
Gene Tree for MIR3937 (if available)
TreeFam:
Gene Tree for MIR3937 (if available)

No data available for Orthologs for MIR3937 Gene

Paralogs for MIR3937 Gene

No data available for Paralogs for MIR3937 Gene

Variants for MIR3937 Gene

Additional dbSNP identifiers (rs#s) for MIR3937 Gene

Structural Variations from Database of Genomic Variants (DGV) for MIR3937 Gene

Variant ID Type Subtype PubMed ID
dgv2281e212 CNV loss 25503493
nsv521450 CNV gain 19592680

Additional Variant Information for MIR3937 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3937

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for MIR3937 Gene

Disorders for MIR3937 Gene

Additional Disease Information for MIR3937

No disorders were found for MIR3937 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3937 Gene

Publications for MIR3937 Gene

  1. Deep sequencing of human nuclear and cytoplasmic small RNAs reveals an unexpectedly complex subcellular distribution of miRNAs and tRNA 3' trailers. (PMID: 20498841) Liao JY … Qu LH (PloS one 2010) 3
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3

Products for MIR3937 Gene

Sources for MIR3937 Gene