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Aliases for MIR3937 Gene

Subcategory (RNA class) for MIR3937 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR3937 Gene

  • MicroRNA 3937 2 3 5
  • Hsa-Mir-3937 3

External Ids for MIR3937 Gene

Previous GeneCards Identifiers for MIR3937 Gene

  • GC0XU901673
  • GC0XP039522

Summaries for MIR3937 Gene

Entrez Gene Summary for MIR3937 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3937 Gene

MIR3937 (MicroRNA 3937) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR3937 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3937 Gene

Genomics for MIR3937 Gene

GeneHancer (GH) Regulatory Elements for MIR3937 Gene

Promoters and enhancers for MIR3937 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI039687 Enhancer 1.1 Ensembl ENCODE 0.3 +27.4 27423 3 ATF1 ZNF2 ZNF121 GLIS2 GATA2 ZNF592 GMEB1 SMARCA4 GLIS1 KLF1 CXorf38 MIR3937 LOC105373178
GH0XI039705 Enhancer 1 Ensembl ENCODE 0.3 +44.3 44341 1 CTCF MXI1 JUN MAX FEZF1 ZNF644 RAD21 RFX5 FOSL1 ZNF335 MIR3937 LOC105373178
GH0XI039644 Enhancer 0.7 Ensembl ENCODE 0.4 -15.7 -15672 1.2 ZNF148 FOSL1 MEF2D RFX1 MIR3937 ENSG00000234191
GH0XI039619 Enhancer 0.8 ENCODE 0.3 -41.3 -41344 0.2 MEIS2 PKNOX1 ETV1 TEAD4 TAL1 E4F1 TCF12 CTBP1 ZNF766 GATA3 MIR3937 ENSG00000234191
GH0XI039751 Enhancer 1.2 Ensembl ENCODE 0.2 +91.9 91889 2.4 ATF1 GLI4 BRCA1 YY1 TCF12 ELK1 ZNF548 ATF7 DEK NCOA1 BCOR MED14 LOC105373178 MIR3937
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR3937 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR3937 Gene

Genomic Locations for MIR3937 Gene
chrX:39,661,216-39,661,321
(GRCh38/hg38)
Size:
106 bases
Orientation:
Plus strand
chrX:39,520,470-39,520,575
(GRCh37/hg19)

Genomic View for MIR3937 Gene

Genes around MIR3937 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3937 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3937 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3937 Gene

Proteins for MIR3937 Gene

Post-translational modifications for MIR3937 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3937 Gene

Domains & Families for MIR3937 Gene

Gene Families for MIR3937 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3937: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3937 Gene

Function for MIR3937 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3937 Gene

Localization for MIR3937 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3937 Gene

Pathways & Interactions for MIR3937 Gene

SuperPathways for MIR3937 Gene

No Data Available

Interacting Proteins for MIR3937 Gene

Gene Ontology (GO) - Biological Process for MIR3937 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3937 Gene

Drugs & Compounds for MIR3937 Gene

No Compound Related Data Available

Transcripts for MIR3937 Gene

mRNA/cDNA for MIR3937 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3937 Gene

No ASD Table

Relevant External Links for MIR3937 Gene

GeneLoc Exon Structure for
MIR3937
ECgene alternative splicing isoforms for
MIR3937

Expression for MIR3937 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR3937 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3937 Gene:

MIR3937
genes like me logo Genes that share expression patterns with MIR3937: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3937 Gene

Orthologs for MIR3937 Gene

Evolution for MIR3937 Gene

ENSEMBL:
Gene Tree for MIR3937 (if available)
TreeFam:
Gene Tree for MIR3937 (if available)

No data available for Orthologs for MIR3937 Gene

Paralogs for MIR3937 Gene

No data available for Paralogs for MIR3937 Gene

Variants for MIR3937 Gene

Sequence variations from dbSNP and Humsavar for MIR3937 Gene

SNP ID Clin Chr 0X pos Variation AA Info Type
rs1001598702 -- 39,660,623(+) T/C upstream_transcript_variant
rs1003769315 -- 39,661,765(+) A/G downstream_transcript_variant
rs1005829599 -- 39,661,169(+) C/A upstream_transcript_variant
rs1006510137 -- 39,660,947(+) A/ upstream_transcript_variant
rs1006521508 -- 39,660,475(+) A/G upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR3937 Gene

Variant ID Type Subtype PubMed ID
nsv521450 CNV gain 19592680
dgv2281e212 CNV loss 25503493

Additional Variant Information for MIR3937 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3937

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3937 Gene

Disorders for MIR3937 Gene

Additional Disease Information for MIR3937

No disorders were found for MIR3937 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3937 Gene

Publications for MIR3937 Gene

  1. Deep sequencing of human nuclear and cytoplasmic small RNAs reveals an unexpectedly complex subcellular distribution of miRNAs and tRNA 3' trailers. (PMID: 20498841) Liao JY … Qu LH (PloS one 2010) 3 58
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR3937 Gene

Sources for MIR3937 Gene

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