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Aliases for MIR381 Gene

Subcategory (RNA class) for MIR381 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR381 Gene

  • MicroRNA 381 2 3 5
  • Hsa-Mir-381 3
  • Mir-381 3
  • MIRN381 3

External Ids for MIR381 Gene

ORGUL Members for MIR381 Gene

Previous HGNC Symbols for MIR381 Gene

  • MIRN381

Previous GeneCards Identifiers for MIR381 Gene

  • GC14P100824
  • GC14P100914
  • GC14P101515
  • GC14P101544
  • GC14P101577
  • GC14P101618
  • GC14P101646
  • GC14P101679
  • GC14P101717
  • GC14P101759
  • GC14P101817
  • GC14P101957
  • GC14P102153
  • GC14P101256
  • GC14P101866
  • GC14P102116
  • GC14P102354
  • GC14P102525
  • GC14P102704
  • GC14P102872

Summaries for MIR381 Gene

Entrez Gene Summary for MIR381 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR381 Gene

MIR381 (MicroRNA 381) is an RNA Gene, and is affiliated with the miRNA class. Among its related pathways are Respiratory electron transport, ATP synthesis by chemiosmotic coupling, and heat production by uncoupling proteins..

Additional gene information for MIR381 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR381 Gene

Genomics for MIR381 Gene

GeneHancer (GH) Regulatory Elements for MIR381 Gene

Promoters and enhancers for MIR381 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14I101287 Enhancer 0.9 ENCODE 9.4 +243.0 243001 2.5 FOXA2 MLX ZFP64 ARID4B ZNF48 ETS1 YY1 RXRA SP5 NFYC MEG3 MIR1185-2 MIR381 MIR487B MIR539 MIR544A MIR889 MIR655 MIR1185-1 MIR300
GH14I101333 Enhancer 0.9 ENCODE 8.9 +289.1 289137 2.2 ELF3 FOXA2 ARID4B ZSCAN9 RAD21 RARA YY1 CREM THAP11 MIXL1 ENSG00000258460 GC14M101304 MIR381 MIR487B MIR539 MIR544A MIR655 MIR889 MIR376C MIR1185-1
GH14I101215 Enhancer 0.8 ENCODE 9.9 +170.8 170804 2.8 FOXA2 ARID4B RAD21 ZNF48 ZSCAN9 RARA CREM RXRA CEBPB NR2F2 LOC100128373 SNORD113-3 SNORD113-4 SNORD113-6 SNORD113-7 SNORD113-8 SNORD113-9 MIR543 ENSG00000222185 ENSG00000222095
GH14I101004 Enhancer 0.7 Ensembl ENCODE 10.9 -40.8 -40835 1.9 GATA3 MNT MYC TCF7L2 MIR134 MIR487A MIR154 MIR323B MIR485 MIR377 MIR496 MIR376C MIR1185-1 MIR1185-2
GH14I101096 Enhancer 0.7 FANTOM5 ENCODE 10.7 +52.4 52428 3.2 ATF4 POLR2A JUN MAFK RTL1 LOC105370670 MEG9 MIR369 MIR409 MIR410 MIR412 MIR541 MIR656 MIR154
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR381 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR381 Gene

Genomic Locations for MIR381 Gene
chr14:101,045,920-101,045,994
(GRCh38/hg38)
Size:
75 bases
Orientation:
Plus strand
chr14:101,512,257-101,512,331
(GRCh37/hg19)

Genomic View for MIR381 Gene

Genes around MIR381 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR381 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR381 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR381 Gene

Proteins for MIR381 Gene

Post-translational modifications for MIR381 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR381 Gene

Domains & Families for MIR381 Gene

Gene Families for MIR381 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR381: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR381 Gene

Function for MIR381 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR381 Gene

Localization for MIR381 Gene

Gene Ontology (GO) - Cellular Components for MIR381 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005615 extracellular space IDA 26646931
genes like me logo Genes that share ontologies with MIR381: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for MIR381 Gene

Pathways & Interactions for MIR381 Gene

genes like me logo Genes that share pathways with MIR381: view

Pathways by source for MIR381 Gene

1 BioSystems pathway for MIR381 Gene

Interacting Proteins for MIR381 Gene

Gene Ontology (GO) - Biological Process for MIR381 Gene

None

No data available for SIGNOR curated interactions for MIR381 Gene

Drugs & Compounds for MIR381 Gene

No Compound Related Data Available

Transcripts for MIR381 Gene

mRNA/cDNA for MIR381 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR381 Gene

No ASD Table

Relevant External Links for MIR381 Gene

GeneLoc Exon Structure for
MIR381
ECgene alternative splicing isoforms for
MIR381

Expression for MIR381 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR381 Gene:

MIR381
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR381 Gene

Orthologs for MIR381 Gene

This gene was present in the common ancestor of mammals.

Orthologs for MIR381 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ptr-mir-381 34
  • 100 (a)
OneToOne
dog
(Canis familiaris)
Mammalia cfa-mir-381 34
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia bta-mir-381 34
  • 92 (a)
OneToOne
mouse
(Mus musculus)
Mammalia mmu-mir-381 34
  • 83 (a)
OneToOne
Species where no ortholog for MIR381 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MIR381 Gene

ENSEMBL:
Gene Tree for MIR381 (if available)
TreeFam:
Gene Tree for MIR381 (if available)

Paralogs for MIR381 Gene

No data available for Paralogs for MIR381 Gene

Variants for MIR381 Gene

Sequence variations from dbSNP and Humsavar for MIR381 Gene

SNP ID Clin Chr 14 pos Variation AA Info Type
rs1000942364 -- 101,046,276(+) G/A downstream_transcript_variant
rs1002539468 -- 101,044,069(+) G/A upstream_transcript_variant
rs1002583356 -- 101,045,115(+) G/A upstream_transcript_variant
rs1003662338 -- 101,045,775(+) T/C upstream_transcript_variant
rs1003695067 -- 101,044,703(+) C/G/T upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR381 Gene

Variant ID Type Subtype PubMed ID
esv3635521 CNV gain 21293372
nsv1040993 CNV gain 25217958
nsv565859 CNV gain 21841781
nsv565860 CNV gain 21841781

Additional Variant Information for MIR381 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR381

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR381 Gene

Disorders for MIR381 Gene

Additional Disease Information for MIR381

Genetic Association Database
(GAD)
Human Genome Epidemiology Navigator
(HuGE)
ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for MIR381 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR381 Gene

Publications for MIR381 Gene

  1. Novel genetic variants in miR-191 gene and familial ovarian cancer. (PMID: 20167074) Shen J … Zhao H (BMC cancer 2010) 3 44 58
  2. miR-381 inhibited breast cancer cells proliferation, epithelial-to-mesenchymal transition and metastasis by targeting CXCR4. (PMID: 28012397) Xue Y … Wu P (Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie 2017) 3 58
  3. MicroRNA-381 inhibits the metastasis of gastric cancer by targeting TMEM16A expression. (PMID: 28193228) Cao Q … Wang L (Journal of experimental & clinical cancer research : CR 2017) 3 58
  4. Association of MicroRNAs and YRNAs With Platelet Function. (PMID: 26646931) Kaudewitz D … Mayr M (Circulation research 2016) 3 58
  5. Epigenetic regulation of SMARCB1 By miR-206, -381 and -671-5p is evident in a variety of SMARCB1 immunonegative soft tissue sarcomas, while miR-765 appears specific for epithelioid sarcoma. A miRNA study of 223 soft tissue sarcomas. (PMID: 27223121) Sápi Z … Fletcher CD (Genes, chromosomes & cancer 2016) 3 58

Products for MIR381 Gene

Sources for MIR381 Gene

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