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Aliases for MIR3713 Gene

Subcategory (RNA class) for MIR3713 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR3713 Gene

  • MicroRNA 3713 2 3 5
  • Hsa-Mir-3713 3

External Ids for MIR3713 Gene

Previous GeneCards Identifiers for MIR3713 Gene

  • GC15U901303
  • GC15P076880

Summaries for MIR3713 Gene

Entrez Gene Summary for MIR3713 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3713 Gene

MIR3713 (MicroRNA 3713) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR3713 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3713 Gene

Genomics for MIR3713 Gene

GeneHancer (GH) Regulatory Elements for MIR3713 Gene

Promoters and enhancers for MIR3713 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15I076576 Enhancer 0.9 Ensembl ENCODE 0.4 -9.6 -9630 1.2 EBF1 RAD21 RARA TEAD3 NR2F6 SP5 TEAD1 RXRA NFIA NR2F1 SCAPER ISL2 MIR3713 GC15M076541 GC15M076576
GH15I076588 Enhancer 0.3 ENCODE 0.8 +2.7 2713 0.9 KLF1 SCAPER MIR3713 GC15M076576
GH15I076578 Enhancer 0.2 ENCODE 0.4 -8.4 -8392 0.2 MIR3713 GC15M076541 GC15M076576 SCAPER
GH15I076609 Enhancer 0.2 FANTOM5 0.3 +22.8 22767 0.2 SCAPER MIR3713 GC15M076576
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR3713 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR3713 Gene

Genomic Locations for MIR3713 Gene
chr15:76,586,647-76,586,691
(GRCh38/hg38)
Size:
45 bases
Orientation:
Plus strand
chr15:76,878,988-76,879,032
(GRCh37/hg19)

Genomic View for MIR3713 Gene

Genes around MIR3713 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3713 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3713 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3713 Gene

Proteins for MIR3713 Gene

Post-translational modifications for MIR3713 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3713 Gene

Domains & Families for MIR3713 Gene

Gene Families for MIR3713 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3713: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3713 Gene

Function for MIR3713 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3713 Gene

Localization for MIR3713 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3713 Gene

Pathways & Interactions for MIR3713 Gene

SuperPathways for MIR3713 Gene

No Data Available

Interacting Proteins for MIR3713 Gene

Gene Ontology (GO) - Biological Process for MIR3713 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3713 Gene

Drugs & Compounds for MIR3713 Gene

No Compound Related Data Available

Transcripts for MIR3713 Gene

mRNA/cDNA for MIR3713 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3713 Gene

No ASD Table

Relevant External Links for MIR3713 Gene

GeneLoc Exon Structure for
MIR3713
ECgene alternative splicing isoforms for
MIR3713

Expression for MIR3713 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3713 Gene:

MIR3713
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3713 Gene

Orthologs for MIR3713 Gene

Evolution for MIR3713 Gene

ENSEMBL:
Gene Tree for MIR3713 (if available)
TreeFam:
Gene Tree for MIR3713 (if available)

No data available for Orthologs for MIR3713 Gene

Paralogs for MIR3713 Gene

No data available for Paralogs for MIR3713 Gene

Variants for MIR3713 Gene

Sequence variations from dbSNP and Humsavar for MIR3713 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1000104676 -- 76,584,671(+) A/G upstream_transcript_variant
rs1001732364 -- 76,586,019(+) T/C upstream_transcript_variant
rs1002102783 -- 76,585,723(+) G/C upstream_transcript_variant
rs1002704023 -- 76,587,116(+) G/A downstream_transcript_variant
rs1003375669 -- 76,587,175(+) T/C downstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR3713 Gene

Variant ID Type Subtype PubMed ID
nsv471254 CNV loss 18288195
nsv1620 CNV deletion 18451855
nsv1160306 CNV deletion 26073780
nsv1116463 OTHER inversion 24896259
nsv1052133 CNV gain 25217958
nsv1043878 CNV gain+loss 25217958
nsv1042514 CNV gain 25217958
nsv1042089 CNV loss 25217958
esv3584695 CNV loss 24956385
esv3569709 CNV gain 25503493
esv2760392 CNV loss 21179565
esv2749898 CNV deletion 23290073
dgv4632n54 CNV loss 21841781
dgv2629n100 CNV gain 25217958
dgv2628n100 CNV gain 25217958
dgv2627n100 CNV gain 25217958
dgv109n111 CNV deletion 26073780

Additional Variant Information for MIR3713 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3713

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3713 Gene

Disorders for MIR3713 Gene

Additional Disease Information for MIR3713

No disorders were found for MIR3713 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3713 Gene

Publications for MIR3713 Gene

  1. Deep sequencing reveals differential expression of microRNAs in favorable versus unfavorable neuroblastoma. (PMID: 20466808) Schulte JH … Schramm A (Nucleic acids research 2010) 3 58
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR3713 Gene

Sources for MIR3713 Gene

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