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Aliases for MIR3665 Gene

Subcategory (RNA class) for MIR3665 Gene


Quality Score for this RNA gene is


Aliases for MIR3665 Gene

  • MicroRNA 3665 2 3 5
  • Hsa-Mir-3665 3

External Ids for MIR3665 Gene

Previous GeneCards Identifiers for MIR3665 Gene

  • GC13U900812
  • GC13M078274

Summaries for MIR3665 Gene

Entrez Gene Summary for MIR3665 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3665 Gene

MIR3665 (MicroRNA 3665) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR3665 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3665 Gene

Genomics for MIR3665 Gene

GeneHancer (GH) Regulatory Elements for MIR3665 Gene

Promoters and enhancers for MIR3665 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13I077696 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 550.8 +0.3 285 3.4 HDGF PKNOX1 ARNT SIN3A FEZF1 BRCA1 GLIS2 ZNF143 RUNX3 SP3 MIR3665 SLAIN1 RPL31P54 LOC100129307
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR3665 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR3665 Gene

Genomic Locations for MIR3665 Gene
105 bases
Minus strand

Genomic View for MIR3665 Gene

Genes around MIR3665 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3665 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3665 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3665 Gene

Proteins for MIR3665 Gene

Post-translational modifications for MIR3665 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3665 Gene

Domains & Families for MIR3665 Gene

Gene Families for MIR3665 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3665: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3665 Gene

Function for MIR3665 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3665 Gene

Localization for MIR3665 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3665 Gene

Pathways & Interactions for MIR3665 Gene

SuperPathways for MIR3665 Gene

No Data Available

Interacting Proteins for MIR3665 Gene

Gene Ontology (GO) - Biological Process for MIR3665 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR3665 Gene

Drugs & Compounds for MIR3665 Gene

No Compound Related Data Available

Transcripts for MIR3665 Gene

mRNA/cDNA for MIR3665 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3665 Gene

No ASD Table

Relevant External Links for MIR3665 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR3665 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR3665 Gene

mRNA differential expression in normal tissues according to GTEx for MIR3665 Gene

This gene is overexpressed in Brain - Spinal cord (cervical c-1) (x10.3), Brain - Substantia nigra (x5.2), and Brain - Hippocampus (x4.2).

NURSA nuclear receptor signaling pathways regulating expression of MIR3665 Gene:

genes like me logo Genes that share expression patterns with MIR3665: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3665 Gene

Orthologs for MIR3665 Gene

Evolution for MIR3665 Gene

Gene Tree for MIR3665 (if available)
Gene Tree for MIR3665 (if available)

No data available for Orthologs for MIR3665 Gene

Paralogs for MIR3665 Gene

No data available for Paralogs for MIR3665 Gene

Variants for MIR3665 Gene

Sequence variations from dbSNP and Humsavar for MIR3665 Gene

SNP ID Clin Chr 13 pos Variation AA Info Type
rs1000917550 -- 77,699,417(-) G/A upstream_transcript_variant
rs1001050209 -- 77,698,889(-) T/A/C upstream_transcript_variant
rs1001205161 -- 77,697,722(-) A/G downstream_transcript_variant
rs1001440038 -- 77,699,102(-) G/A upstream_transcript_variant
rs1001720034 -- 77,698,579(-) C/G/T upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR3665 Gene

Variant ID Type Subtype PubMed ID
nsv951899 CNV duplication 24416366
nsv562388 CNV loss 21841781
nsv562387 CNV loss 21841781
nsv562377 CNV gain 21841781
nsv562376 CNV loss 21841781
nsv1136173 CNV deletion 24896259
nsv1070597 CNV deletion 25765185
esv23084 CNV loss 19812545
dgv3263n54 CNV loss 21841781
dgv3262n54 CNV gain 21841781

Additional Variant Information for MIR3665 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3665 Gene

Disorders for MIR3665 Gene

Additional Disease Information for MIR3665

No disorders were found for MIR3665 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3665 Gene

Publications for MIR3665 Gene

  1. Large-scale expression analysis reveals distinct microRNA profiles at different stages of human neurodevelopment. (PMID: 20559549) Smith B … Sikorska M (PloS one 2010) 3 58
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58
  3. Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals. (PMID: 15735639) Xie X … Kellis M (Nature 2005) 3 58

Products for MIR3665 Gene

Sources for MIR3665 Gene

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