Aliases for MIR3659HG Gene

Subcategory (RNA class) for MIR3659HG Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for MIR3659HG Gene

  • MIR3659 Host Gene 2 3 5
  • NONHSAG001090 92
  • HSALNG0002686 167
  • Lnc-UTP11-1 168
  • MIR3659HG 2

External Ids for MIR3659HG Gene

Summaries for MIR3659HG Gene

GeneCards Summary for MIR3659HG Gene

MIR3659HG (MIR3659 Host Gene) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for MIR3659HG Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MIR3659HG Gene

Genomics for MIR3659HG Gene

GeneHancer (GH) Regulatory Elements for MIR3659HG Gene

Promoters and enhancers for MIR3659HG Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J038046 Promoter/Enhancer 1.6 Ensembl ENCODE CraniofacialAtlas 500.7 -0.9 -939 4.4 SP1 ZIC2 REST ZBTB10 ZNF423 GABPA ZBTB26 SAP30 KLF7 MYC MIR3659HG POU3F1 lnc-POU3F1-3
GH01J038094 Enhancer 1.2 VISTA UCNEbase Ensembl 10.6 +47.0 47028 3.9 ZNF341 SMARCA5 BCOR PRDM6 FEZF1 ZMYM3 TRIM28 ZFP36 DACH1 EZH2 MIR3659HG POU3F1 MIR3659 RF00017-166
GH01J038825 Enhancer 1.2 VISTA Ensembl ENCODE 9.8 +784.9 784874 12 CTCF USF1 TRIM28 REST MYC CTBP1 RAD21 TRIM22 ATF2 SMC3 MYCBP GJA9 UTP11 FHL3 MIR3659HG POU3F1 RHBDL2 NDUFS5 piR-45411 lnc-AKIRIN1-7
GH01J038075 Enhancer 0.8 Ensembl 11.4 +29.4 29361 1 REST ZBTB11 AFF1 GABPA ZBTB26 HINFP ZSCAN9 MIER1 HDAC2 ZBTB17 POU3F1 MIR3659HG ENSG00000223589 lnc-POU3F1-4
GH01J038152 Enhancer 0.9 Ensembl ENCODE 10.6 +106.0 106022 3.1 HNRNPK CTCF NFYB SMC3 TCF12 SRF MEF2B POLR2A EBF1 IKZF1 MIR3659HG POU3F1 ENSG00000237749 ENSG00000286552 LOC105378654 ENSG00000287987
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR3659HG on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR3659HG Gene

Genomic Locations for MIR3659HG Gene
chr1:38,046,940-38,121,056
(GRCh38/hg38)
Size:
74,117 bases
Orientation:
Plus strand
chr1:38,512,986-38,584,697
(GRCh37/hg19)
Size:
71,712 bases
Orientation:
Plus strand

Genomic View for MIR3659HG Gene

Genes around MIR3659HG on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3659HG Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3659HG Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3659HG Gene

Proteins for MIR3659HG Gene

Post-translational modifications for MIR3659HG Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3659HG Gene

Domains & Families for MIR3659HG Gene

Gene Families for MIR3659HG Gene

genes like me logo Genes that share domains with MIR3659HG: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MIR3659HG Gene

Function for MIR3659HG Gene

Phenotypes From GWAS Catalog for MIR3659HG Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3659HG Gene

Localization for MIR3659HG Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3659HG Gene

Pathways & Interactions for MIR3659HG Gene

PathCards logo

SuperPathways for MIR3659HG Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for MIR3659HG Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MIR3659HG Gene

Drugs & Compounds for MIR3659HG Gene

No Compound Related Data Available

Transcripts for MIR3659HG Gene

mRNA/cDNA for MIR3659HG Gene

12 RNACentral transcripts :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
3 NONCODE transcripts :
2 LncBook transcripts :
11 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3659HG Gene

No ASD Table

Relevant External Links for MIR3659HG Gene

GeneLoc Exon Structure for
MIR3659HG

Expression for MIR3659HG Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3659HG Gene

Orthologs for MIR3659HG Gene

Evolution for MIR3659HG Gene

ENSEMBL:
Gene Tree for MIR3659HG (if available)
TreeFam:
Gene Tree for MIR3659HG (if available)

No data available for Orthologs for MIR3659HG Gene

Paralogs for MIR3659HG Gene

No data available for Paralogs for MIR3659HG Gene

Variants for MIR3659HG Gene

Additional dbSNP identifiers (rs#s) for MIR3659HG Gene

Additional Variant Information for MIR3659HG Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3659HG

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR3659HG Gene

Disorders for MIR3659HG Gene

No disorders were found for MIR3659HG Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for MIR3659HG Gene

Publications for MIR3659HG Gene

No publications were found for MIR3659HG Gene.

No data available for Mastermind for MIR3659HG Gene

Products for MIR3659HG Gene

Sources for MIR3659HG Gene