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Aliases for MIR3656 Gene

Subcategory (RNA class) for MIR3656 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR3656 Gene

  • MicroRNA 3656 2 3 5
  • Hsa-Mir-3656 3
  • Mir-3656 3

External Ids for MIR3656 Gene

Previous GeneCards Identifiers for MIR3656 Gene

  • GC11U901768
  • GC11P118896
  • GC11P119020
  • GC11P119024
  • GC11P119027
  • GC11P119031
  • GC11P119036
  • GC11P119039
  • GC11P119041

Summaries for MIR3656 Gene

Entrez Gene Summary for MIR3656 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3656 Gene

MIR3656 (MicroRNA 3656) is an RNA Gene, and is affiliated with the miRNA class. Among its related pathways are Metabolism of proteins and Transport to the Golgi and subsequent modification.

Additional gene information for MIR3656 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3656 Gene

Genomics for MIR3656 Gene

GeneHancer (GH) Regulatory Elements for MIR3656 Gene

Promoters and enhancers for MIR3656 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I119015 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 550.8 -0.9 -883 4.6 HDGF PKNOX1 CLOCK SMAD1 ARNT ARID4B SIN3A FEZF1 DMAP1 YY1 TRAPPC4 GC11P119045 PIR32149 MIR3656 RPS25 PIR60932 BCL9L ARCN1 ENSG00000254909 UBE4A
GH11I119024 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 0.4 +9.0 8988 7.3 HDGF PKNOX1 FOXA2 CLOCK MLX ARID4B SIN3A DMAP1 ZNF2 YY1 SLC37A4 TRAPPC4 VPS11 MIR3656
GH11I119020 Enhancer 0.8 ENCODE 0.8 +2.7 2724 1.9 ELF3 FOXA2 RARA YY1 CREM HMG20B RXRA CEBPB REST NR2F2 TRAPPC4 RPS25 MIR3656 SLC37A4
GH11I119023 Enhancer 0.5 ENCODE 0.4 +5.0 5022 0.2 OSR2 HIC1 GLIS1 FEZF1 TRAPPC4 MIR3656 SLC37A4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR3656 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR3656 Gene

Genomic Locations for MIR3656 Gene
chr11:119,018,944-119,019,012
(GRCh38/hg38)
Size:
69 bases
Orientation:
Plus strand
chr11:118,889,654-118,889,722
(GRCh37/hg19)

Genomic View for MIR3656 Gene

Genes around MIR3656 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3656 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3656 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3656 Gene

Proteins for MIR3656 Gene

Post-translational modifications for MIR3656 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3656 Gene

Domains & Families for MIR3656 Gene

Gene Families for MIR3656 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3656: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3656 Gene

Function for MIR3656 Gene

Phenotypes From GWAS Catalog for MIR3656 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3656 Gene

Localization for MIR3656 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3656 Gene

Drugs & Compounds for MIR3656 Gene

No Compound Related Data Available

Transcripts for MIR3656 Gene

mRNA/cDNA for MIR3656 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3656 Gene

No ASD Table

Relevant External Links for MIR3656 Gene

GeneLoc Exon Structure for
MIR3656
ECgene alternative splicing isoforms for
MIR3656

Expression for MIR3656 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR3656 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3656 Gene:

MIR3656
genes like me logo Genes that share expression patterns with MIR3656: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3656 Gene

Orthologs for MIR3656 Gene

Evolution for MIR3656 Gene

ENSEMBL:
Gene Tree for MIR3656 (if available)
TreeFam:
Gene Tree for MIR3656 (if available)

No data available for Orthologs for MIR3656 Gene

Paralogs for MIR3656 Gene

No data available for Paralogs for MIR3656 Gene

Variants for MIR3656 Gene

Sequence variations from dbSNP and Humsavar for MIR3656 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000730956 -- 119,017,219(+) G/A upstream_transcript_variant
rs1001022384 -- 119,018,706(+) G/A/T upstream_transcript_variant
rs1001474460 -- 119,018,506(+) A/G upstream_transcript_variant
rs1001527529 -- 119,017,265(+) T/C upstream_transcript_variant
rs1001558402 -- 119,017,693(+) A/G upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR3656 Gene

Variant ID Type Subtype PubMed ID
nsv826101 CNV gain 20364138

Additional Variant Information for MIR3656 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3656

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3656 Gene

Disorders for MIR3656 Gene

Additional Disease Information for MIR3656

No disorders were found for MIR3656 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3656 Gene

Publications for MIR3656 Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A … Griffiths-Jones S (Nucleic acids research 2011) 58
  2. Discovery of microRNAs and other small RNAs in solid tumors. (PMID: 20483914) Meiri E … Sitbon E (Nucleic acids research 2010) 58
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 58

Products for MIR3656 Gene

Sources for MIR3656 Gene

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