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Aliases for MIR3613 Gene

Subcategory (RNA class) for MIR3613 Gene


Quality Score for this RNA gene is


Aliases for MIR3613 Gene

  • MicroRNA 3613 2 3 5
  • Hsa-Mir-3613 3

External Ids for MIR3613 Gene

Previous GeneCards Identifiers for MIR3613 Gene

  • GC13U900807
  • GC13M050574

Summaries for MIR3613 Gene

Entrez Gene Summary for MIR3613 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3613 Gene

MIR3613 (MicroRNA 3613) is an RNA Gene, and is affiliated with the miRNA class.

fRNAdb sequence ontologies for MIR3613 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for MIR3613

Additional gene information for MIR3613 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for MIR3613 Gene

Genomics for MIR3613 Gene

GeneHancer (GH) Regulatory Elements for MIR3613 Gene

Promoters and enhancers for MIR3613 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13I049995 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 550.8 -1.0 -1001 4.4 SMAD1 ARID4B SIN3A DMAP1 ZBTB7B YY1 POLR2B ZNF766 ZNF213 ZNF207 TRIM13 SPRYD7 MIR3613 DLEU1 EBPL CTAGE10P RNASEH2B KCNRG DLEU2
GH13I050015 Promoter 0.6 EPDnew 0.4 -18.7 -18650 0.1 GLIS1 KCNRG TRIM13 MIR3613 DLEU2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR3613 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR3613 Gene

Genomic Locations for MIR3613 Gene
87 bases
Minus strand

Genomic View for MIR3613 Gene

Genes around MIR3613 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3613 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3613 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3613 Gene

ORGUL Member Location for MIR3613 Gene

ORGUL Member Location for MIR3613 gene

Proteins for MIR3613 Gene

Post-translational modifications for MIR3613 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3613 Gene

Domains & Families for MIR3613 Gene

Gene Families for MIR3613 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3613: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3613 Gene

Function for MIR3613 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3613 Gene

Localization for MIR3613 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3613 Gene

Pathways & Interactions for MIR3613 Gene

SuperPathways for MIR3613 Gene

No Data Available

Interacting Proteins for MIR3613 Gene

Gene Ontology (GO) - Biological Process for MIR3613 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR3613 Gene

Drugs & Compounds for MIR3613 Gene

No Compound Related Data Available

Transcripts for MIR3613 Gene

fRNAdb Secondary structures for MIR3613 Gene

  • FR300064

mRNA/cDNA for MIR3613 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3613 Gene

No ASD Table

Relevant External Links for MIR3613 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR3613 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR3613 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3613 Gene:

genes like me logo Genes that share expression patterns with MIR3613: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3613 Gene

Orthologs for MIR3613 Gene

Evolution for MIR3613 Gene

Gene Tree for MIR3613 (if available)
Gene Tree for MIR3613 (if available)

No data available for Orthologs for MIR3613 Gene

Paralogs for MIR3613 Gene

No data available for Paralogs for MIR3613 Gene

Variants for MIR3613 Gene

Sequence variations from dbSNP and Humsavar for MIR3613 Gene

SNP ID Clin Chr 13 pos Variation AA Info Type
rs1001758007 -- 49,998,199(-) C/T upstream_transcript_variant
rs1002388596 -- 49,997,480(-) A/G upstream_transcript_variant
rs1002810375 -- 49,997,387(-) T/C upstream_transcript_variant
rs1003787296 -- 49,995,992(-) G/A downstream_transcript_variant
rs1004457149 -- 49,996,713(-) C/A upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR3613 Gene

Variant ID Type Subtype PubMed ID
nsv561618 CNV loss 21841781
nsv1118263 CNV deletion 24896259
nsv1035151 CNV loss 25217958

Additional Variant Information for MIR3613 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3613 Gene

Disorders for MIR3613 Gene

Additional Disease Information for MIR3613

No disorders were found for MIR3613 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3613 Gene

Publications for MIR3613 Gene

  1. Monocyte Chemoattractant Protein-Induced Protein 1 Overexpression Modulates Transcriptome, Including MicroRNA, in Human Neuroblastoma Cells. (PMID: 26308737) Boratyn E … Rokita H (Journal of cellular biochemistry 2016) 3 58
  2. Ultra-high throughput sequencing-based small RNA discovery and discrete statistical biomarker analysis in a collection of cervical tumours and matched controls. (PMID: 20459774) Witten D … Lui WO (BMC biology 2010) 3 58
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58
  4. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  5. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for MIR3613 Gene

Sources for MIR3613 Gene

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