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Aliases for MIR320E Gene

Subcategory (RNA class) for MIR320E Gene


Quality Score for this RNA gene is


Aliases for MIR320E Gene

  • MicroRNA 320e 2 3 5
  • Hsa-Mir-320e 3
  • Mir-320e 3

External Ids for MIR320E Gene

Previous GeneCards Identifiers for MIR320E Gene

  • GC19U901374
  • GC19M043637
  • GC19M047213

Summaries for MIR320E Gene

Entrez Gene Summary for MIR320E Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR320E Gene

MIR320E (MicroRNA 320e) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR320E Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR320E Gene

Genomics for MIR320E Gene

GeneHancer (GH) Regulatory Elements for MIR320E Gene

Promoters and enhancers for MIR320E Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J046710 Enhancer 0.6 Ensembl ENCODE 600.7 -1.3 -1341 1 ZBTB33 POLR2A KLF1 GC19M046711 MIR320E PRKD2 FKRP STRN4
GH19J046764 Enhancer 1.3 Ensembl ENCODE dbSUPER 11.2 -55.6 -55647 1.6 ELF3 ZNF121 CEBPG ZNF384 ZNF644 KAT8 CEBPA GATAD2A RXRB RCOR2 STRN4 SLC1A5 PRKD2 MIR320E GNG8 TMEM160 ARHGAP35 FKRP PIR51442 ENSG00000275719
GH19J046733 Promoter/Enhancer 1.1 Ensembl ENCODE 12.2 -24.3 -24305 0.9 MAFK FOSL2 SCRT2 FOSL1 DPF2 CTCF FOXA1 FOS ZBTB33 POLR2A STRN4 MIR320E GNG8 ENSG00000222614 GC19M046729 PIR58014
GH19J046737 Enhancer 1 Ensembl ENCODE 12.1 -27.8 -27834 2.1 CC2D1A CBFA2T2 ZNF384 SMARCA4 MTA1 GMEB1 IKZF1 ATF1 REST PKNOX1 ENSG00000222614 STRN4 MIR320E GNG8 FKRP GC19P046740
GH19J046767 Enhancer 1.1 Ensembl dbSUPER 11.2 -57.4 -57447 0.4 CC2D1A CTCF ZNF384 SP7 MTA1 IKZF1 PRDM10 ZNF143 TRIM22 PATZ1 STRN4 SLC1A5 IRF2BP1 PRKD2 MIR320E GNG8 TMEM160 ARHGAP35 PIR51442 ENSG00000275719
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR320E on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR320E Gene

Genomic Locations for MIR320E Gene
73 bases
Minus strand
53 bases
Minus strand

Genomic View for MIR320E Gene

Genes around MIR320E on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR320E Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR320E Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR320E Gene

ORGUL Member Location for MIR320E Gene

ORGUL Member Location for MIR320E gene

Proteins for MIR320E Gene

Post-translational modifications for MIR320E Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR320E Gene

Domains & Families for MIR320E Gene

Gene Families for MIR320E Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR320E: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR320E Gene

Function for MIR320E Gene

Phenotypes From GWAS Catalog for MIR320E Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR320E Gene

Localization for MIR320E Gene

Gene Ontology (GO) - Cellular Components for MIR320E Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0035068 micro-ribonucleoprotein complex IEA --
genes like me logo Genes that share ontologies with MIR320E: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for MIR320E Gene

Pathways & Interactions for MIR320E Gene

PathCards logo

SuperPathways for MIR320E Gene

No Data Available

Interacting Proteins for MIR320E Gene

Gene Ontology (GO) - Biological Process for MIR320E Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0035195 gene silencing by miRNA IEA --
genes like me logo Genes that share ontologies with MIR320E: view

No data available for Pathways by source and SIGNOR curated interactions for MIR320E Gene

Drugs & Compounds for MIR320E Gene

No Compound Related Data Available

Transcripts for MIR320E Gene

mRNA/cDNA for MIR320E Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNA Central transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR320E Gene

No ASD Table

Relevant External Links for MIR320E Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR320E Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR320E Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR320E Gene:

genes like me logo Genes that share expression patterns with MIR320E: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR320E Gene

Orthologs for MIR320E Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for MIR320E Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia ptr-mir-320e 35
  • 100 (a)
Species where no ortholog for MIR320E was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MIR320E Gene

Gene Tree for MIR320E (if available)
Gene Tree for MIR320E (if available)

Paralogs for MIR320E Gene

No data available for Paralogs for MIR320E Gene

Variants for MIR320E Gene

Sequence variations from dbSNP and Humsavar for MIR320E Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1000121965 -- 46,709,636(-) C/G upstream_transcript_variant
rs1001058383 -- 46,710,771(-) T/G upstream_transcript_variant
rs1001489394 -- 46,711,209(-) C/T upstream_transcript_variant
rs1002580036 -- 46,711,265(-) G/A upstream_transcript_variant
rs1002662495 -- 46,710,679(-) C/T upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR320E Gene

Variant ID Type Subtype PubMed ID
nsv833850 CNV loss 17160897

Additional Variant Information for MIR320E Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR320E Gene

Disorders for MIR320E Gene

Additional Disease Information for MIR320E

No disorders were found for MIR320E Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR320E Gene

Publications for MIR320E Gene

  1. MiR-320e is a novel prognostic biomarker in colorectal cancer. (PMID: 26035698) Perez-Carbonell L … Goel A (British journal of cancer 2015) 3 58
  2. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A … Griffiths-Jones S (Nucleic acids research 2011) 3 58
  3. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark MS … Hayward NK (PloS one 2010) 3 58
  4. Ago2 immunoprecipitation identifies predicted microRNAs in human embryonic stem cells and neural precursors. (PMID: 19784364) Goff LA … Hart RP (PloS one 2009) 3 58
  5. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR320E Gene

Sources for MIR320E Gene

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