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Aliases for MIR3202-2 Gene

Subcategory (RNA class) for MIR3202-2 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR3202-2 Gene

  • MicroRNA 3202-2 2 3 5
  • Hsa-Mir-3202-2 3
  • Mir-3202-2 3

External Ids for MIR3202-2 Gene

Previous GeneCards Identifiers for MIR3202-2 Gene

  • GC0XU901576
  • GC0XM153246

Summaries for MIR3202-2 Gene

Entrez Gene Summary for MIR3202-2 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3202-2 Gene

MIR3202-2 (MicroRNA 3202-2) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR3202-2 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3202-2 Gene

Genomics for MIR3202-2 Gene

GeneHancer (GH) Regulatory Elements for MIR3202-2 Gene

Promoters and enhancers for MIR3202-2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI153980 Enhancer 1.3 FANTOM5 Ensembl ENCODE 0.8 -2.6 -2641 7.3 HDGF PKNOX1 TAF9B RB1 NFRKB TCF12 ZNF121 ZNF766 RUNX3 RXRA TMEM187 ARHGAP4 MECP2 ABCD1 TAZ RENBP DNASE1L1 MIR3202-1 MIR3202-2 MIR718
GH0XI154001 Enhancer 1.1 Ensembl ENCODE 0.3 -21.2 -21234 1.7 PKNOX1 ATF1 YY1 ZNF121 ZNF766 RUNX3 CAVIN1 REST ZNF592 MEF2D HCFC1 SNORA70 HCFC1-AS1 TMEM187 IRAK1 SNORA56 PLXNA3 DKC1 MIR718 MIR3202-2
GH0XI154009 Enhancer 1 Ensembl ENCODE 0.3 -30.7 -30681 4.6 CTCF FOXA2 CEBPG DMAP1 ZNF2 THRB RAD21 RARA POLR2A SMC3 TMEM187 F8A1 MIR718 IRAK1 MIR3202-2
GH0XI154007 Enhancer 0.9 Ensembl ENCODE 0.3 -27.0 -26986 1.7 PKNOX1 SMAD1 RB1 BACH1 EBF1 BMI1 IRF4 ZFHX2 POLR2A ATF7 TMEM187 MIR718 MIR3202-2
GH0XI153989 Enhancer 0.4 ENCODE 0.4 -9.0 -9005 0.6 ZNF146 ZMYM3 MIR3202-2 MIR718
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR3202-2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR3202-2 Gene

Genomic Locations for MIR3202-2 Gene
chrX:153,981,098-153,981,176
(GRCh38/hg38)
Size:
79 bases
Orientation:
Minus strand
chrX:153,246,549-153,246,627
(GRCh37/hg19)

Genomic View for MIR3202-2 Gene

Genes around MIR3202-2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3202-2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3202-2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3202-2 Gene

Proteins for MIR3202-2 Gene

Post-translational modifications for MIR3202-2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3202-2 Gene

Domains & Families for MIR3202-2 Gene

Gene Families for MIR3202-2 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3202-2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3202-2 Gene

Function for MIR3202-2 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3202-2 Gene

Localization for MIR3202-2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3202-2 Gene

Pathways & Interactions for MIR3202-2 Gene

SuperPathways for MIR3202-2 Gene

No Data Available

Interacting Proteins for MIR3202-2 Gene

Gene Ontology (GO) - Biological Process for MIR3202-2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3202-2 Gene

Drugs & Compounds for MIR3202-2 Gene

No Compound Related Data Available

Transcripts for MIR3202-2 Gene

mRNA/cDNA for MIR3202-2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3202-2 Gene

No ASD Table

Relevant External Links for MIR3202-2 Gene

GeneLoc Exon Structure for
MIR3202-2
ECgene alternative splicing isoforms for
MIR3202-2

Expression for MIR3202-2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR3202-2 Gene

genes like me logo Genes that share expression patterns with MIR3202-2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3202-2 Gene

Orthologs for MIR3202-2 Gene

Evolution for MIR3202-2 Gene

ENSEMBL:
Gene Tree for MIR3202-2 (if available)
TreeFam:
Gene Tree for MIR3202-2 (if available)

No data available for Orthologs for MIR3202-2 Gene

Paralogs for MIR3202-2 Gene

No data available for Paralogs for MIR3202-2 Gene

Variants for MIR3202-2 Gene

Sequence variations from dbSNP and Humsavar for MIR3202-2 Gene

SNP ID Clin Chr 0X pos Variation AA Info Type
rs1000733473 -- 153,981,254(-) C/G upstream_transcript_variant
rs1003695319 -- 153,982,832(-) G/A upstream_transcript_variant
rs1007720726 -- 153,980,634(-) C/T downstream_transcript_variant
rs1016829758 -- 153,982,901(-) C/T upstream_transcript_variant
rs1017388713 -- 153,980,635(-) G/A downstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR3202-2 Gene

Variant ID Type Subtype PubMed ID
esv33199 CNV gain+loss 17666407
esv33784 CNV gain+loss 17666407
nsv469867 CNV loss 16826518
nsv519506 CNV gain 19592680

Additional Variant Information for MIR3202-2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3202-2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3202-2 Gene

Disorders for MIR3202-2 Gene

Additional Disease Information for MIR3202-2

No disorders were found for MIR3202-2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3202-2 Gene

Publications for MIR3202-2 Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A … Griffiths-Jones S (Nucleic acids research 2011) 3 58
  2. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark MS … Hayward NK (PloS one 2010) 3 58
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR3202-2 Gene

Sources for MIR3202-2 Gene

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