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Aliases for MIR3181 Gene

Subcategory (RNA class) for MIR3181 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR3181 Gene

  • MicroRNA 3181 2 3 5
  • Hsa-Mir-3181 3

External Ids for MIR3181 Gene

Previous GeneCards Identifiers for MIR3181 Gene

  • GC16U901253

Summaries for MIR3181 Gene

Entrez Gene Summary for MIR3181 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3181 Gene

MIR3181 (MicroRNA 3181) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR3181 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3181 Gene

Genomics for MIR3181 Gene

GeneHancer (GH) Regulatory Elements for MIR3181 Gene

Promoters and enhancers for MIR3181 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16I050740 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.8 +2.2 2180 7.7 HDGF PKNOX1 FOXA2 ARID4B SIN3A DMAP1 YY1 SLC30A9 ZNF207 ZNF143 CYLD LOC102724907 NOD2 PAPD5 SNX20 BRD7 ADCY7 MIR3181 LOC105371251
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR3181 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR3181 Gene

Genomic Locations for MIR3181 Gene
chr16:50,742,305-50,742,377
(GRCh38/hg38)
Size:
73 bases
Orientation:
Plus strand
chr16:50,776,216-50,776,288
(GRCh37/hg19)

Genomic View for MIR3181 Gene

Genes around MIR3181 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3181 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3181 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3181 Gene

Proteins for MIR3181 Gene

Post-translational modifications for MIR3181 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3181 Gene

Domains & Families for MIR3181 Gene

Gene Families for MIR3181 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3181: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3181 Gene

Function for MIR3181 Gene

Phenotypes From GWAS Catalog for MIR3181 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3181 Gene

Localization for MIR3181 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3181 Gene

Pathways & Interactions for MIR3181 Gene

SuperPathways for MIR3181 Gene

No Data Available

Interacting Proteins for MIR3181 Gene

Gene Ontology (GO) - Biological Process for MIR3181 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3181 Gene

Drugs & Compounds for MIR3181 Gene

No Compound Related Data Available

Transcripts for MIR3181 Gene

mRNA/cDNA for MIR3181 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3181 Gene

No ASD Table

Relevant External Links for MIR3181 Gene

GeneLoc Exon Structure for
MIR3181
ECgene alternative splicing isoforms for
MIR3181

Expression for MIR3181 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3181 Gene:

MIR3181
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3181 Gene

Orthologs for MIR3181 Gene

Evolution for MIR3181 Gene

ENSEMBL:
Gene Tree for MIR3181 (if available)
TreeFam:
Gene Tree for MIR3181 (if available)

No data available for Orthologs for MIR3181 Gene

Paralogs for MIR3181 Gene

No data available for Paralogs for MIR3181 Gene

Variants for MIR3181 Gene

Sequence variations from dbSNP and Humsavar for MIR3181 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs967314697 uncertain-significance, Spiegler-Brooke syndrome, Trichoepithelioma multiple familial 2, Cylindromatosis, familial 50,742,099(+) G/C upstream_transcript_variant
rs1000122348 -- 50,742,688(+) G/A downstream_transcript_variant
rs1000871644 -- 50,741,865(+) T/G upstream_transcript_variant
rs1002713968 -- 50,742,396(+) C/T downstream_transcript_variant
rs1003112215 -- 50,742,162(+) G/A upstream_transcript_variant

Additional Variant Information for MIR3181 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3181

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR3181 Gene

Disorders for MIR3181 Gene

Additional Disease Information for MIR3181

No disorders were found for MIR3181 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3181 Gene

Publications for MIR3181 Gene

  1. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark MS … Hayward NK (PloS one 2010) 3 58
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR3181 Gene

Sources for MIR3181 Gene

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