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microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The ... See more...
Aliases for MIR3167 Gene
Data sources for MIR3167 Gene:
Subcategory (RNA class) for MIR3167 Gene
miRNA
Aliases for MIR3167 Gene
- MicroRNA 3167 (HGNC, NCBI Entrez Gene, Ensembl)
- Hsa-Mir-3167 (HGNC, NCBI Entrez Gene)
- MIMAT0015042 (miRBase)
- MI0014198 (miRBase)
- MIR3167 (Ensembl)
External Ids for MIR3167 Gene
- HGNC: 38242
- NCBI Entrez Gene: 100422918
- Ensembl: ENSG00000266215
- miRBase: hsa-mir-3167
Previous GeneCards Identifiers for MIR3167 Gene
- GC11U901564
- GC11M126858
Summaries for MIR3167 Gene
-
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
GeneCards Summary for MIR3167 Gene
MIR3167 (MicroRNA 3167) is an RNA Gene, and is affiliated with the miRNA class. Diseases associated with MIR3167 include Jacobsen Syndrome.
Additional gene information for MIR3167 Gene
- HGNC (38242)
- NCBI Entrez Gene (100422918)
- Ensembl (ENSG00000266215)
- Open Targets Platform(ENSG00000266215)
- Search for MIR3167 at DataMed
- Search for MIR3167 at HumanCyc
No data available for CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MIR3167 Gene
Genomics for MIR3167 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for MIR3167 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH11J126970 | Enhancer | 1 | FANTOM5 Ensembl ENCODE dbSUPER | 0.4 | +19.0 | 19041 | 1.8 | CTCF RAD21 EGR1 SMC3 ARNT CEBPB KDM1A | ENSG00000255317 HSALNG0088045 KIRREL3 ENSG00000254938 KIRREL3-AS2 MIR3167 lnc-KIRREL3-1 ST3GAL4 | |
| GH11J126977 | Enhancer | 0.6 | Ensembl ENCODE dbSUPER | 0.4 | +10.0 | 10041 | 1.4 | SIN3A | KIRREL3 KIRREL3-AS3 ENSG00000255317 HSALNG0088045 MIR3167 lnc-KIRREL3-1 ST3GAL4 | |
| GH11J126983 | Enhancer | 0.2 | dbSUPER | 0.7 | +4.1 | 4098 | 1.4 | MIR3167 ENSG00000255317 HSALNG0088045 lnc-KIRREL3-1 KIRREL3 ST3GAL4 | ||
| GH11J126974 | Enhancer | 0.2 | dbSUPER | 0.4 | +12.9 | 12926 | 1.3 | ENSG00000254938 KIRREL3-AS2 KIRREL3 KIRREL3-AS3 ENSG00000255317 HSALNG0088045 MIR3167 lnc-KIRREL3-1 ST3GAL4 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around MIR3167 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for MIR3167 Gene
Latest Assembly
- chr11:126,988,458-126,988,542
- (GRCh38/hg38)
- Size:
- 85 bases
- Orientation:
- Minus strand
Previous Assembly
- chr11:126,858,354-126,858,438
- (GRCh37/hg19 by Entrez Gene)
- Size:
- 85 bases
- Orientation:
- Minus strand
- chr11:126,858,354-126,858,438
- (GRCh37/hg19 by Ensembl)
- Size:
- 85 bases
- Orientation:
- Minus strand
Genomic View for MIR3167 Gene
Genes around MIR3167 on UCSC Golden Path with GeneCards custom track
MIR3167 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path
- Cytogenetic band:
-
- 11q24.2 by HGNC
- 11q24.2 by Entrez Gene
- 11q24.2 by Ensembl
MIR3167 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for MIR3167 Gene
Proteins for MIR3167 Gene
Post-translational modifications for MIR3167 Gene
No Post-translational modifications
No data available for DME Specific Peptides for MIR3167 Gene
Domains & Families for MIR3167 Gene
No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MIR3167 Gene
Function for MIR3167 Gene
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for MIR3167 - Starting at $85 >
- * MIR3167 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
Inhibitory RNAs for research
Clone products for research
- Applied Biological Materials (abm): Clones for MIR3167 - Starting at $45 >
- * MIR3167 as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Retro- | Protein Vector - Browse All
- * Viral Packaging Services and High Titer Production Services also available.
Cell Lines for research
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3167 Gene
Localization for MIR3167 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3167 Gene
Transcripts for MIR3167 Gene
Non-coding RNA (ncRNA) Transcripts from RNAcentral for MIR3167 Gene
| RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
|---|---|---|---|---|
| URS000075A4F3_9606 | precursor_RNA | 85 | 3 |
RefSeq: NR_036126, Ensembl: ENST00000579623 (view in UCSC) , miRBase: MI0014198, |
| URS000075AD9F_9606 | miRNA | 22 | 2 |
RefSeq: NR_036126, miRBase: MIMAT0015042, |
MIR3167 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for MIR3167 - Starting at $85 >
- * MIR3167 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
Inhibitory RNAs for research
Clone products for research
- Applied Biological Materials (abm): Clones for MIR3167 - Starting at $45 >
- * MIR3167 as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Retro- | Protein Vector - Browse All
- * Viral Packaging Services and High Titer Production Services also available.
Relevant External Links for MIR3167 Gene
- GeneLoc Exon Structure for
- MIR3167
No data available for mRNA/cDNA for MIR3167 Gene
Expression for MIR3167 Gene
Primer products for research
-
OriGene qPCR primer pairs for MIR3167
Gene Expression Assays for research
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3167 Gene
Orthologs for MIR3167 Gene
No data available for Orthologs for MIR3167 Gene
Paralogs for MIR3167 Gene
No data available for Paralogs for MIR3167 Gene
Variants for MIR3167 Gene
All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| esv2761719 | CNV | gain | 21179565 |
| nsv539 | CNV | insertion | 18451855 |
Additional Variant Information for MIR3167 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- MIR3167
SNP Genotyping and Copy Number Assays for research
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for MIR3167 Gene
Disorders for MIR3167 Gene
| Disorder | Aliases | PubMed IDs |
|---|---|---|
| jacobsen syndrome |
|
|
Search MIR3167 in MalaCards
View complete list of genes associated with diseases
Additional Disease Information for MIR3167
- Atlas
- ATLAS of Genetics and Cytogenetics in Oncology and Haematology
- Open Targets Platform
- Open Targets Platform
No data available for UniProtKB/Swiss-Prot and Genatlas for MIR3167 Gene
Publications for MIR3167 Gene
- Genomewide pharmacogenomic study of metabolic side effects to antipsychotic drugs. (PMID: 20195266) Adkins DE … van den Oord EJ (Molecular psychiatry 2011) 3
- Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark MS … Hayward NK (PloS one 2010) 3
- Discovery of novel microRNAs in female reproductive tract using next generation sequencing. (PMID: 20224791) Creighton CJ … Gunaratne PH (PloS one 2010) 3
- miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3
ExternalLinks
Products for MIR3167 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for MIR3167
- Origene Custom Protein Services for MIR3167
- Browse OriGene Inhibitory RNA Products For MIR3167
- OriGene qPCR primer pairs for MIR3167
- Browse CRISPR knockouts for MIR3167
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For MIR3167
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for MIR3167
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for MIR3167
- Search GeneCopoeia for miRNA 3'UTR Target clone products for MIR3167
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for MIR3167
Sources for MIR3167 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB