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Aliases for MIR3164 Gene

Subcategory (RNA class) for MIR3164 Gene


Quality Score for this RNA gene is


Aliases for MIR3164 Gene

  • MicroRNA 3164 2 3 5
  • Hsa-Mir-3164 3

External Ids for MIR3164 Gene

Previous GeneCards Identifiers for MIR3164 Gene

  • GC11U901687
  • GC11P068850

Summaries for MIR3164 Gene

Entrez Gene Summary for MIR3164 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3164 Gene

MIR3164 (MicroRNA 3164) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR3164 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3164 Gene

Genomics for MIR3164 Gene

GeneHancer (GH) Regulatory Elements for MIR3164 Gene

Promoters and enhancers for MIR3164 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I069078 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.8 -3.0 -3008 2.4 MAZ POLR2A MAX MYC E2F6 CHD2 NFE2L2 PIR48560 TPCN2 IGHMBP2 MIR3164
GH11I069086 Enhancer 0.6 ENCODE dbSUPER 0.8 +3.1 3102 0.2 CTCF SCRT2 ZBTB33 MIR3164 ENSG00000260895 TPCN2
GH11I069088 Enhancer 0.9 ENCODE dbSUPER 0.4 +5.7 5682 0.2 HDGF CTCF RB1 ARID4B SIN3A IRF4 RAD21 CC2D1A POLR2A EGR1 MIR3164 ENSG00000260895 TPCN2
GH11I069090 Enhancer 0.8 ENCODE dbSUPER 0.4 +6.0 5956 0.1 CTCF RB1 ARID4B TRIM22 SIN3A CC2D1A POLR2A KLF9 ZNF143 ZNF444 MIR3164 ENSG00000260895 TPCN2
GH11I069101 Enhancer 0.8 ENCODE 0.4 +18.4 18442 0.2 HDGF ATF1 RB1 ARID4B SIN3A ZBTB7B IRF4 RAD21 RFX5 ZEB1 ENSG00000260895 TPCN2 MIR3164
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR3164 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR3164 Gene

Genomic Locations for MIR3164 Gene
83 bases
Plus strand

Genomic View for MIR3164 Gene

Genes around MIR3164 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3164 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3164 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3164 Gene

Proteins for MIR3164 Gene

Post-translational modifications for MIR3164 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3164 Gene

Domains & Families for MIR3164 Gene

Gene Families for MIR3164 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3164: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3164 Gene

Function for MIR3164 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3164 Gene

Localization for MIR3164 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3164 Gene

Pathways & Interactions for MIR3164 Gene

SuperPathways for MIR3164 Gene

No Data Available

Interacting Proteins for MIR3164 Gene

Gene Ontology (GO) - Biological Process for MIR3164 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR3164 Gene

Drugs & Compounds for MIR3164 Gene

No Compound Related Data Available

Transcripts for MIR3164 Gene

mRNA/cDNA for MIR3164 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3164 Gene

No ASD Table

Relevant External Links for MIR3164 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR3164 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR3164 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3164 Gene:

genes like me logo Genes that share expression patterns with MIR3164: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3164 Gene

Orthologs for MIR3164 Gene

Evolution for MIR3164 Gene

Gene Tree for MIR3164 (if available)
Gene Tree for MIR3164 (if available)

No data available for Orthologs for MIR3164 Gene

Paralogs for MIR3164 Gene

No data available for Paralogs for MIR3164 Gene

Variants for MIR3164 Gene

Sequence variations from dbSNP and Humsavar for MIR3164 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000192593 -- 69,082,324(+) A/G upstream_transcript_variant
rs1001807615 -- 69,083,679(+) G/A downstream_transcript_variant
rs1002133702 -- 69,083,487(+) A/G downstream_transcript_variant
rs1003400466 -- 69,082,671(+) T/C upstream_transcript_variant
rs1003472467 -- 69,081,287(+) G/A upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR3164 Gene

Variant ID Type Subtype PubMed ID
nsv468620 CNV loss 19166990
nsv469967 CNV loss 18288195
nsv555300 CNV loss 21841781
nsv555301 CNV loss 21841781
nsv825970 CNV gain 20364138
nsv832196 CNV loss 17160897

Additional Variant Information for MIR3164 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3164 Gene

Disorders for MIR3164 Gene

Additional Disease Information for MIR3164

No disorders were found for MIR3164 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3164 Gene

Publications for MIR3164 Gene

  1. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark MS … Hayward NK (PloS one 2010) 3 58
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR3164 Gene

Sources for MIR3164 Gene

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