microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The ... See more...

Aliases for MIR3155B Gene

Data sources for MIR3155B Gene:

RNA type for MIR3155B Gene

miRNA

Aliases for MIR3155B Gene

External Ids for MIR3155B Gene

Previous GeneCards Identifiers for MIR3155B Gene

  • GC10U901551
  • GC10M006195

Summaries for MIR3155B Gene

Entrez Gene Summary for MIR3155B Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3155B Gene

MIR3155B (MicroRNA 3155b) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR3155B Gene

No data available for CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MIR3155B Gene

Genomics for MIR3155B Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for MIR3155B Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J006150 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 250.7 +0.9 866 2 IKZF1 CTCF REST SIN3A TRIM22 ZNF341 MNT SMC3 NKRF ELF1 HSALNG0075924 HSALNG0075925 RN7SKP78 MIR3155A MIR3155B lnc-RBM17-3 PFKFB3 IL15RA RBM17 GDI2
GH10J006153 Enhancer 0.4 dbSUPER 250.7 -1.1 -1114 0.3 ZNF217 CTBP1 ESRRA HSALNG0075924 MIR3155A MIR3155B piR-57461-019 PFKFB3 PRKCQ
GH10J006156 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 -5.7 -5739 3.2 JUND TBP MAFK ZBTB33 SREBF1 NFE2L2 SPI1 EP300 FOS SIN3A piR-57461-019 MIR3155B PFKFB3 PRKCQ
GH10J006154 Enhancer 0.6 ENCODE dbSUPER 0.7 -2.5 -2486 0.6 ZBTB33 EGR2 ESRRA MIR3155B piR-57461-019 PFKFB3 PRKCQ
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR3155B on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for MIR3155B Gene

Latest Assembly
chr10:6,152,207-6,152,262
(GRCh38/hg38)
Size:
56 bases
Orientation:
Minus strand

Previous Assembly
chr10:6,194,170-6,194,225
(GRCh37/hg19 by Entrez Gene)
Size:
56 bases
Orientation:
Minus strand

Genomic View for MIR3155B Gene

Genes around MIR3155B on UCSC Golden Path with GeneCards custom track
MIR3155B in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
MIR3155B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3155B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3155B Gene

Proteins for MIR3155B Gene

Post-translational modifications for MIR3155B Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3155B Gene

Domains & Families for MIR3155B Gene

Gene Families for MIR3155B Gene

HGNC:
genes like me logo Genes that share domains with MIR3155B: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MIR3155B Gene

Function for MIR3155B Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3155B Gene

Localization for MIR3155B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3155B Gene

Pathways & Interactions for MIR3155B Gene

PathCards logo

SuperPathways for MIR3155B Gene

No Data Available

Gene Ontology (GO) - Biological Process for MIR3155B Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MIR3155B Gene

Drugs & Compounds for MIR3155B Gene

No Compound Related Data Available

Transcripts for MIR3155B Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for MIR3155B Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS000075B877_9606 pre_miRNA 56 3

RefSeq: NR_039698,

Ensembl: ENST00000636544 (view in UCSC) ,

miRBase: MI0016839,

URS0000759908_9606 miRNA 18 2

RefSeq: NR_039698,

miRBase: MIMAT0019012,

MIR3155B in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3155B Gene

No ASD Table

Relevant External Links for MIR3155B Gene

GeneLoc Exon Structure for
MIR3155B

No data available for mRNA/cDNA for MIR3155B Gene

Expression for MIR3155B Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for MIR3155B

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3155B Gene

Orthologs for MIR3155B Gene

Evolution for MIR3155B Gene

ENSEMBL:
Gene Tree for MIR3155B (if available)
TreeFam:
Gene Tree for MIR3155B (if available)
Alliance of Genome Resources:
Additional Orthologs for MIR3155B

No data available for Orthologs for MIR3155B Gene

Paralogs for MIR3155B Gene

No data available for Paralogs for MIR3155B Gene

Variants for MIR3155B Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for MIR3155B Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for MIR3155B Gene

Variant ID Type Subtype PubMed ID
dgv1e49 CNV loss 18971310
esv3622241 CNV gain 21293372
nsv7198 OTHER inversion 18451855

Additional Variant Information for MIR3155B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3155B
Leiden Open Variation Database (LOVD)
MIR3155B

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for MIR3155B Gene

Disorders for MIR3155B Gene

Additional Disease Information for MIR3155B

No disorders were found for MIR3155B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3155B Gene

Publications for MIR3155B Gene

  1. Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs. (PMID: 20733160) Jima DD … Hematologic Malignancies Research Consortium (Blood 2010) 3
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3

Products for MIR3155B Gene

Sources for MIR3155B Gene