microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The ... See more...

Aliases for MIR3155A Gene

Data sources for MIR3155A Gene:

RNA type for MIR3155A Gene

miRNA

Aliases for MIR3155A Gene

External Ids for MIR3155A Gene

Previous HGNC Symbols for MIR3155A Gene

  • MIR3155

Previous GeneCards Identifiers for MIR3155A Gene

  • GC10P006195

Summaries for MIR3155A Gene

Entrez Gene Summary for MIR3155A Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3155A Gene

MIR3155A (MicroRNA 3155a) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR3155A Gene

No data available for CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MIR3155A Gene

Genomics for MIR3155A Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for MIR3155A Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J006150 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 250.7 -0.8 -800 2 IKZF1 CTCF REST SIN3A TRIM22 ZNF341 MNT SMC3 NKRF ELF1 HSALNG0075924 HSALNG0075925 RN7SKP78 MIR3155A MIR3155B lnc-RBM17-3 PFKFB3 IL15RA RBM17 GDI2
GH10J006153 Enhancer 0.4 dbSUPER 250.7 +1.2 1180 0.3 ZNF217 CTBP1 ESRRA HSALNG0075924 MIR3155A MIR3155B piR-57461-019 PFKFB3 PRKCQ
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR3155A on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for MIR3155A Gene

Latest Assembly
chr10:6,152,196-6,152,277
(GRCh38/hg38)
Size:
82 bases
Orientation:
Plus strand

Previous Assembly
chr10:6,194,159-6,194,240
(GRCh37/hg19 by Entrez Gene)
Size:
82 bases
Orientation:
Plus strand

chr10:6,194,159-6,194,240
(GRCh37/hg19 by Ensembl)
Size:
82 bases
Orientation:
Plus strand

Genomic View for MIR3155A Gene

Genes around MIR3155A on UCSC Golden Path with GeneCards custom track
MIR3155A in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
MIR3155A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3155A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3155A Gene

Proteins for MIR3155A Gene

Post-translational modifications for MIR3155A Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3155A Gene

Domains & Families for MIR3155A Gene

Gene Families for MIR3155A Gene

HGNC:
genes like me logo Genes that share domains with MIR3155A: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MIR3155A Gene

Function for MIR3155A Gene

Phenotypes From GWAS Catalog for MIR3155A Gene

CRISPR products for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3155A Gene

Localization for MIR3155A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3155A Gene

Pathways & Interactions for MIR3155A Gene

PathCards logo

SuperPathways for MIR3155A Gene

No Data Available

Gene Ontology (GO) - Biological Process for MIR3155A Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MIR3155A Gene

Drugs & Compounds for MIR3155A Gene

No Compound Related Data Available

Transcripts for MIR3155A Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for MIR3155A Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS000075C9CE_9606 precursor_RNA 82 4

RefSeq: NR_036111,

Ensembl: ENST00000577482 (view in UCSC) ,

miRBase: MI0014183,

ENA: LM611008.1:1..82:precursor_RNA,

URS00002D349B_9606 miRNA 21 3

RefSeq: NR_036111,

miRBase: MIMAT0015029,

ENA: LM381652.1:1..21:ncRNA, LM611008.1:52..72:ncRNA,

MIR3155A in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for MIR3155A Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3155A Gene

No ASD Table

Relevant External Links for MIR3155A Gene

GeneLoc Exon Structure for
MIR3155A

Expression for MIR3155A Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR3155A Gene

genes like me logo Genes that share expression patterns with MIR3155A: view

Primer products for research

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3155A Gene

Orthologs for MIR3155A Gene

Evolution for MIR3155A Gene

ENSEMBL:
Gene Tree for MIR3155A (if available)
TreeFam:
Gene Tree for MIR3155A (if available)
Alliance of Genome Resources:
Additional Orthologs for MIR3155A

No data available for Orthologs for MIR3155A Gene

Paralogs for MIR3155A Gene

No data available for Paralogs for MIR3155A Gene

Variants for MIR3155A Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for MIR3155A Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for MIR3155A Gene

Variant ID Type Subtype PubMed ID
dgv1e49 CNV loss 18971310
esv3622241 CNV gain 21293372
nsv7198 OTHER inversion 18451855

Additional Variant Information for MIR3155A Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3155A
Leiden Open Variation Database (LOVD)
MIR3155A

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for MIR3155A Gene

Disorders for MIR3155A Gene

Additional Disease Information for MIR3155A

No disorders were found for MIR3155A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3155A Gene

Publications for MIR3155A Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A … Griffiths-Jones S (Nucleic acids research 2011) 3
  2. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark MS … Hayward NK (PloS one 2010) 3
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3

Products for MIR3155A Gene

Sources for MIR3155A Gene