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Aliases for MIR3154 Gene

Subcategory (RNA class) for MIR3154 Gene


Quality Score for this RNA gene is


Aliases for MIR3154 Gene

  • MicroRNA 3154 2 3 5
  • Hsa-Mir-3154 3
  • Mir-3154 3

External Ids for MIR3154 Gene

Previous GeneCards Identifiers for MIR3154 Gene

  • GC09U901553
  • GC09M131008
  • GC09M131009

Summaries for MIR3154 Gene

Entrez Gene Summary for MIR3154 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3154 Gene

MIR3154 (MicroRNA 3154) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR3154 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3154 Gene

Genomics for MIR3154 Gene

GeneHancer (GH) Regulatory Elements for MIR3154 Gene

Promoters and enhancers for MIR3154 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I128241 Enhancer 1.3 FANTOM5 Ensembl ENCODE 550.8 +0.7 704 5.7 HDAC1 ELF3 HDGF PKNOX1 ATF1 NFXL1 DNMT3B GLIS2 EGR1 ARID2 MIR199B MIR3154 GLE1 NUP188 NAIF1 URM1 SLC27A4 PHYHD1 SWI5 ST6GALNAC6
GH09I128249 Promoter/Enhancer 1.2 Ensembl ENCODE 0.4 -5.3 -5349 1.4 HDGF KLF1 ATF1 TEAD4 RELA ZKSCAN1 CTBP1 POLR2A KLF8 CHD2 GC09M128249 URM1 MIR3154 DNM1
GH09I128251 Enhancer 0.4 ENCODE 0.4 -6.8 -6770 0.3 ATF1 CEBPB NR2F2 PIR51353 PIR52778 GC09M128249 CIZ1 C9orf16 LCN2 MIR3154 DNM1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR3154 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR3154 Gene

Genomic Locations for MIR3154 Gene
84 bases
Minus strand

Genomic View for MIR3154 Gene

Genes around MIR3154 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3154 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3154 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3154 Gene

ORGUL Member Location for MIR3154 Gene

ORGUL Member Location for MIR3154 gene

Proteins for MIR3154 Gene

Post-translational modifications for MIR3154 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3154 Gene

Domains & Families for MIR3154 Gene

Gene Families for MIR3154 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3154: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3154 Gene

Function for MIR3154 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3154 Gene

Localization for MIR3154 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3154 Gene

Pathways & Interactions for MIR3154 Gene

SuperPathways for MIR3154 Gene

No Data Available

Interacting Proteins for MIR3154 Gene

Gene Ontology (GO) - Biological Process for MIR3154 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR3154 Gene

Drugs & Compounds for MIR3154 Gene

No Compound Related Data Available

Transcripts for MIR3154 Gene

mRNA/cDNA for MIR3154 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3154 Gene

No ASD Table

Relevant External Links for MIR3154 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR3154 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR3154 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3154 Gene:

genes like me logo Genes that share expression patterns with MIR3154: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3154 Gene

Orthologs for MIR3154 Gene

Evolution for MIR3154 Gene

Gene Tree for MIR3154 (if available)
Gene Tree for MIR3154 (if available)

No data available for Orthologs for MIR3154 Gene

Paralogs for MIR3154 Gene

No data available for Paralogs for MIR3154 Gene

Variants for MIR3154 Gene

Sequence variations from dbSNP and Humsavar for MIR3154 Gene

SNP ID Clin Chr 09 pos Variation AA Info Type
rs111534551 benign, not specified, Epileptic encephalopathy, early infantile, 31 128,246,486(-) C/T upstream_transcript_variant
rs145318071 likely-benign, not specified, Epileptic encephalopathy, early infantile, 31 128,246,429(-) C/G/T upstream_transcript_variant
rs772239774 uncertain-significance, Epileptic encephalopathy, early infantile, 31 128,246,494(-) C/T upstream_transcript_variant
rs776254391 likely-benign, not specified 128,246,465(-) G/A upstream_transcript_variant
rs1001157151 -- 128,246,086(-) T/A upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR3154 Gene

Variant ID Type Subtype PubMed ID
nsv831728 CNV loss 17160897
nsv951772 CNV deletion 24416366

Additional Variant Information for MIR3154 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3154 Gene

Disorders for MIR3154 Gene

Additional Disease Information for MIR3154

No disorders were found for MIR3154 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3154 Gene

Publications for MIR3154 Gene

  1. Transcription factors are targeted by differentially expressed miRNAs in primates. (PMID: 22454130) Dannemann M … Kelso J (Genome biology and evolution 2012) 3 58
  2. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A … Griffiths-Jones S (Nucleic acids research 2011) 3 58
  3. Discovery of new microRNAs by small RNAome deep sequencing in childhood acute lymphoblastic leukemia. (PMID: 21606961) Schotte D … den Boer ML (Leukemia 2011) 3 58
  4. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark MS … Hayward NK (PloS one 2010) 3 58
  5. Ago2 immunoprecipitation identifies predicted microRNAs in human embryonic stem cells and neural precursors. (PMID: 19784364) Goff LA … Hart RP (PloS one 2009) 3 58

Products for MIR3154 Gene

Sources for MIR3154 Gene

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