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Aliases for MIR3124 Gene

Subcategory (RNA class) for MIR3124 Gene


Quality Score for this RNA gene is


Aliases for MIR3124 Gene

  • MicroRNA 3124 2 3 5
  • Hsa-Mir-3124 3
  • Mir-3124 3

External Ids for MIR3124 Gene

Previous GeneCards Identifiers for MIR3124 Gene

  • GC01U903036
  • GC01P219361
  • GC01P249120

Summaries for MIR3124 Gene

Entrez Gene Summary for MIR3124 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3124 Gene

MIR3124 (MicroRNA 3124) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR3124 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3124 Gene

Genomics for MIR3124 Gene

GeneHancer (GH) Regulatory Elements for MIR3124 Gene

Promoters and enhancers for MIR3124 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I248820 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 550.8 -1.4 -1437 9.8 HDGF PKNOX1 FOXA2 SMAD1 ARNT ARID4B SIN3A DMAP1 ZNF2 IRF4 SH3BP5L MIR3124 PGBD2 ENSG00000227237 ZNF692 RNU6-1205P RPL23AP25 GC01P248810
GH01I248816 Enhancer 0.7 Ensembl ENCODE 0.4 -9.4 -9376 1.2 POLR2A CEBPB MAX MYC SPI1 ZNF672 ZNF692 ENSG00000227237 PGBD2 SH3BP5L GC01P248810 MIR3124
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR3124 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR3124 Gene

Genomic Locations for MIR3124 Gene
67 bases
Plus strand

Genomic View for MIR3124 Gene

Genes around MIR3124 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3124 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3124 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3124 Gene

Proteins for MIR3124 Gene

Post-translational modifications for MIR3124 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3124 Gene

Domains & Families for MIR3124 Gene

Gene Families for MIR3124 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3124: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3124 Gene

Function for MIR3124 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3124 Gene

Localization for MIR3124 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3124 Gene

Pathways & Interactions for MIR3124 Gene

SuperPathways for MIR3124 Gene

No Data Available

Interacting Proteins for MIR3124 Gene

Gene Ontology (GO) - Biological Process for MIR3124 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR3124 Gene

Drugs & Compounds for MIR3124 Gene

No Compound Related Data Available

Transcripts for MIR3124 Gene

mRNA/cDNA for MIR3124 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3124 Gene

No ASD Table

Relevant External Links for MIR3124 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR3124 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR3124 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3124 Gene:

genes like me logo Genes that share expression patterns with MIR3124: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3124 Gene

Orthologs for MIR3124 Gene

Evolution for MIR3124 Gene

Gene Tree for MIR3124 (if available)
Gene Tree for MIR3124 (if available)

No data available for Orthologs for MIR3124 Gene

Paralogs for MIR3124 Gene

No data available for Paralogs for MIR3124 Gene

Variants for MIR3124 Gene

Sequence variations from dbSNP and Humsavar for MIR3124 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1002298778 -- 248,825,595(+) C/T upstream_transcript_variant
rs1002413396 -- 248,825,324(+) GC/ upstream_transcript_variant
rs1003300462 -- 248,826,444(+) G/A downstream_transcript_variant
rs1003382599 -- 248,825,780(+) C/T upstream_transcript_variant
rs1003416358 -- 248,826,347(+) G/A upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR3124 Gene

Variant ID Type Subtype PubMed ID
nsv999043 CNV gain 25217958
nsv5398 CNV insertion 18451855
esv2750835 CNV gain 17911159
esv2750832 CNV gain 17911159
dgv631n100 CNV gain 25217958

Additional Variant Information for MIR3124 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3124 Gene

Disorders for MIR3124 Gene

Additional Disease Information for MIR3124

No disorders were found for MIR3124 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3124 Gene

Publications for MIR3124 Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A … Griffiths-Jones S (Nucleic acids research 2011) 3 58
  2. Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. (PMID: 21199797) Persson H … Rovira C (Cancer research 2011) 3 58
  3. Discovery of novel microRNAs in female reproductive tract using next generation sequencing. (PMID: 20224791) Creighton CJ … Gunaratne PH (PloS one 2010) 3 58
  4. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark MS … Hayward NK (PloS one 2010) 3 58
  5. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR3124 Gene

Sources for MIR3124 Gene

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