microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The ... See more...

Aliases for MIR3119-1 Gene

Subcategory (RNA class) for MIR3119-1 Gene

miRNA

Number of RNA Genes sources:

1 / 14

Aliases for MIR3119-1 Gene

  • MicroRNA 3119-1 2 3 5
  • Hsa-Mir-3119-1 3
  • MIMAT0014981 51
  • MI0014134 51
  • MIR3119-1 2

External Ids for MIR3119-1 Gene

Previous GeneCards Identifiers for MIR3119-1 Gene

  • GC01U902909
  • GC01M170120

Summaries for MIR3119-1 Gene

Entrez Gene Summary for MIR3119-1 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3119-1 Gene

MIR3119-1 (MicroRNA 3119-1) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR3119-1 Gene

No data available for CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MIR3119-1 Gene

Genomics for MIR3119-1 Gene

GeneHancer (GH) Regulatory Elements for MIR3119-1 Gene

Promoters and enhancers for MIR3119-1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J170162 Enhancer 0.6 Ensembl ENCODE 0.4 -11.5 -11479 1.1 ZNF664 BHLHE40 SIN3A MYC METTL18 KIFAP3 MIR3119-1 LINC01681 METTL11B
GH01J170167 Enhancer 0.4 Ensembl 0.4 -16.2 -16239 0.2 ZNF189 IRF9 HLF ZNF24 LINC01681 MIR3119-1 METTL11B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR3119-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR3119-1 Gene

Genomic Locations for MIR3119-1 Gene
chr1:170,151,378-170,151,462
(GRCh38/hg38)
Size:
85 bases
Orientation:
Minus strand
chr1:170,120,519-170,120,603
(GRCh37/hg19)
Size:
85 bases
Orientation:
Minus strand

Genomic View for MIR3119-1 Gene

Genes around MIR3119-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3119-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3119-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3119-1 Gene

Proteins for MIR3119-1 Gene

Post-translational modifications for MIR3119-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3119-1 Gene

Domains & Families for MIR3119-1 Gene

Gene Families for MIR3119-1 Gene

HGNC:
genes like me logo Genes that share domains with MIR3119-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MIR3119-1 Gene

Function for MIR3119-1 Gene

Phenotypes From GWAS Catalog for MIR3119-1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3119-1 Gene

Localization for MIR3119-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3119-1 Gene

Pathways & Interactions for MIR3119-1 Gene

PathCards logo

SuperPathways for MIR3119-1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for MIR3119-1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MIR3119-1 Gene

Drugs & Compounds for MIR3119-1 Gene

No Compound Related Data Available

Transcripts for MIR3119-1 Gene

mRNA/cDNA for MIR3119-1 Gene

2 RNACentral transcripts :
2 REFSEQ mRNAs :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 miRBase transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3119-1 Gene

No ASD Table

Relevant External Links for MIR3119-1 Gene

GeneLoc Exon Structure for
MIR3119-1

Expression for MIR3119-1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR3119-1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for MIR3119-1

genes like me logo Genes that share expression patterns with MIR3119-1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3119-1 Gene

Orthologs for MIR3119-1 Gene

Evolution for MIR3119-1 Gene

ENSEMBL:
Gene Tree for MIR3119-1 (if available)
TreeFam:
Gene Tree for MIR3119-1 (if available)

No data available for Orthologs for MIR3119-1 Gene

Paralogs for MIR3119-1 Gene

No data available for Paralogs for MIR3119-1 Gene

Variants for MIR3119-1 Gene

Additional dbSNP identifiers (rs#s) for MIR3119-1 Gene

Structural Variations from Database of Genomic Variants (DGV) for MIR3119-1 Gene

Variant ID Type Subtype PubMed ID
nsv1078878 OTHER inversion 25765185
nsv999310 CNV loss 25217958

Additional Variant Information for MIR3119-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3119-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for MIR3119-1 Gene

Disorders for MIR3119-1 Gene

Additional Disease Information for MIR3119-1

No disorders were found for MIR3119-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3119-1 Gene

Publications for MIR3119-1 Gene

  1. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark MS … Hayward NK (PloS one 2010) 3 54
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 54

Products for MIR3119-1 Gene

Sources for MIR3119-1 Gene