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Aliases for MIR29B2CHG Gene

Subcategory (RNA class) for MIR29B2CHG Gene

miRNA

Quality Score for this RNA gene is

2

Aliases for MIR29B2CHG Gene

  • MIR29B2 And MIR29C Host Gene 2 3
  • Chromosome 1 Open Reading Frame 132 2
  • C1orf132 3

External Ids for MIR29B2CHG Gene

Previous HGNC Symbols for MIR29B2CHG Gene

  • C1orf132

Summaries for MIR29B2CHG Gene

GeneCards Summary for MIR29B2CHG Gene

MIR29B2CHG (MIR29B2 And MIR29C Host Gene) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR29B2CHG Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR29B2CHG Gene

Genomics for MIR29B2CHG Gene

GeneHancer (GH) Regulatory Elements for MIR29B2CHG Gene

Promoters and enhancers for MIR29B2CHG Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I207860 Promoter/Enhancer 1.9 Ensembl ENCODE dbSUPER 0.8 +3.0 2980 11.2 HDGF PKNOX1 ATF1 SIN3A IRF4 ZNF766 GLIS2 ZNF143 ATF7 RUNX3 CD46 CD34 CD55 MIR29B2CHG PIR33548 GC01P207829
GH01I207872 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.8 -4.1 -4140 2 HDAC1 ZBTB40 TCF12 ZNF766 ETV6 ATF7 IKZF2 RUNX3 CBFB ZBTB11 MIR29B2CHG CD34
GH01I207907 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.3 -41.2 -41174 5.6 CTCF ZNF76 ZIC2 RAD21 ZFHX2 GLIS2 PRDM10 ZNF600 EGR2 EZH2 CD34 C4BPA MIR29B2CHG
GH01I207846 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +18.8 18776 7 ELF3 PKNOX1 FOXA2 RARA EGR1 ETV6 ELF1 PPARG NR2F2 ZNF592 CD46 CD34 CR1L PLXNA2 CR1 MIR29B2CHG GC01P207829 PIR33548
GH01I207882 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 -15.4 -15408 4.2 HDGF ARNT ZNF2 YY1 ARID2 ZNF207 ZNF143 ATF7 ZNF263 REST CD34 PLXNA2 MIR29B2CHG
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR29B2CHG on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR29B2CHG Gene

Genomic Locations for MIR29B2CHG Gene
chr1:207,761,719-207,869,072
(GRCh38/hg38)
Size:
107,354 bases
Orientation:
Minus strand
chr1:207,974,863-208,042,495
(GRCh37/hg19)

Genomic View for MIR29B2CHG Gene

Genes around MIR29B2CHG on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR29B2CHG Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR29B2CHG Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR29B2CHG Gene

Proteins for MIR29B2CHG Gene

Post-translational modifications for MIR29B2CHG Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR29B2CHG Gene

Domains & Families for MIR29B2CHG Gene

Suggested Antigen Peptide Sequences for MIR29B2CHG Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for MIR29B2CHG Gene

Function for MIR29B2CHG Gene

Phenotypes From GWAS Catalog for MIR29B2CHG Gene

Phenotypes for MIR29B2CHG Gene

GenomeRNAi human phenotypes for MIR29B2CHG:
genes like me logo Genes that share phenotypes with MIR29B2CHG: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR29B2CHG Gene

Localization for MIR29B2CHG Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for MIR29B2CHG gene
Compartment Confidence
mitochondrion 2
plasma membrane 1
extracellular 1
nucleus 1
cytosol 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR29B2CHG Gene

Pathways & Interactions for MIR29B2CHG Gene

SuperPathways for MIR29B2CHG Gene

No Data Available

Interacting Proteins for MIR29B2CHG Gene

Gene Ontology (GO) - Biological Process for MIR29B2CHG Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR29B2CHG Gene

Drugs & Compounds for MIR29B2CHG Gene

No Compound Related Data Available

Transcripts for MIR29B2CHG Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR29B2CHG Gene

No ASD Table

Relevant External Links for MIR29B2CHG Gene

GeneLoc Exon Structure for
MIR29B2CHG
ECgene alternative splicing isoforms for
MIR29B2CHG

No data available for mRNA/cDNA for MIR29B2CHG Gene

Expression for MIR29B2CHG Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR29B2CHG Gene:

MIR29B2CHG
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR29B2CHG Gene

Orthologs for MIR29B2CHG Gene

No data available for Orthologs and Evolution for MIR29B2CHG Gene

Paralogs for MIR29B2CHG Gene

No data available for Paralogs for MIR29B2CHG Gene

Variants for MIR29B2CHG Gene

Sequence variations from dbSNP and Humsavar for MIR29B2CHG Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000058028 -- 207,808,689(-) T/C intron_variant
rs1000209585 -- 207,808,235(-) C/A intron_variant
rs1000219913 -- 207,821,907(-) C/T intron_variant
rs1000252476 -- 207,821,566(-) C/T intron_variant
rs1000416979 -- 207,802,346(-) G/A non_coding_transcript_variant

Additional Variant Information for MIR29B2CHG Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR29B2CHG

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR29B2CHG Gene

Disorders for MIR29B2CHG Gene

Additional Disease Information for MIR29B2CHG

No disorders were found for MIR29B2CHG Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR29B2CHG Gene

Publications for MIR29B2CHG Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 2 3 58
  2. Biological insights from 108 schizophrenia-associated genetic loci. (PMID: 25056061) Schizophrenia Working Group of the Psychiatric Genomics Consortium (Nature 2014) 3 58
  3. Widespread microRNA repression by Myc contributes to tumorigenesis. (PMID: 18066065) Chang TC … Mendell JT (Nature genetics 2008) 3 58

Products for MIR29B2CHG Gene

Sources for MIR29B2CHG Gene

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