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Aliases for MIR2117HG Gene

Subcategory (RNA class) for MIR2117HG Gene

miRNA

Quality Score for this RNA gene is

13

Aliases for MIR2117HG Gene

  • MIR2117 Host Gene 2 3 5

External Ids for MIR2117HG Gene

Previous GeneCards Identifiers for MIR2117HG Gene

  • GC17U902508
  • GC17P043447
  • GC17P043448
  • GC17P043449
  • GC17P043450
  • GC17P043485
  • GC17P043559

Summaries for MIR2117HG Gene

GeneCards Summary for MIR2117HG Gene

MIR2117HG (MIR2117 Host Gene) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR2117HG Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR2117HG Gene

Genomics for MIR2117HG Gene

GeneHancer (GH) Regulatory Elements for MIR2117HG Gene

Promoters and enhancers for MIR2117HG Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J043443 Enhancer 0.9 ENCODE dbSUPER 665.4 -0.4 -399 1.9 FEZF1 RAD21 YY1 GATA3 SCRT2 PRDM10 MAFK STAT1 HMG20B YY2 MIR2117HG GC17P043535 MIR2117 RNU6-406P GC17M043406
GH17J043398 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 51.4 -43.3 -43262 6.3 SMAD1 MLX ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ZNF766 ARL4D MIR2117HG RPL29P31 NBR2 NBR1 COASY HMGN1P29 ETV4 DHX8 RNU6-470P
GH17J043428 Enhancer 0.7 dbSUPER 37.7 -15.2 -15192 1.2 CTCF ZFP64 YY1 FOSL1 ZNF335 TRIM24 ZNF600 TCF7L2 GATAD2A ZNF280D MIR2117HG RNU6-1137P ARL4D DHX8 MEOX1 LINC00910 GC17M043406 GC17P043513
GH17J043481 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 10.7 +39.0 38986 3.5 MLX ZFP64 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 NFYC DHX8 TMUB2 ETV4 HMGN1P29 NBR2 RETREG3 ENSG00000267340 ASB16-AS1 LINC00910 UBTF
GH17J043524 Promoter/Enhancer 1.8 EPDnew ENCODE dbSUPER 10.7 +83.9 83944 7.7 PKNOX1 FOXA2 MLX ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ETV4 RPL29P31 MEOX1 MIR2117HG NBR1 RNU6-406P MIR2117 SOST GC17P043647 PIR45394
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR2117HG on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR2117HG Gene

Genomic Locations for MIR2117HG Gene
chr17:43,444,707-43,451,200
(GRCh38/hg38)
Size:
6,494 bases
Orientation:
Plus strand

Genomic View for MIR2117HG Gene

Genes around MIR2117HG on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR2117HG Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR2117HG Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR2117HG Gene

Proteins for MIR2117HG Gene

Post-translational modifications for MIR2117HG Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR2117HG Gene

Domains & Families for MIR2117HG Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR2117HG Gene

Function for MIR2117HG Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR2117HG Gene

Localization for MIR2117HG Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR2117HG Gene

Pathways & Interactions for MIR2117HG Gene

SuperPathways for MIR2117HG Gene

No Data Available

Interacting Proteins for MIR2117HG Gene

Gene Ontology (GO) - Biological Process for MIR2117HG Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR2117HG Gene

Drugs & Compounds for MIR2117HG Gene

No Compound Related Data Available

Transcripts for MIR2117HG Gene

mRNA/cDNA for MIR2117HG Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(2) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR2117HG Gene

No ASD Table

Relevant External Links for MIR2117HG Gene

GeneLoc Exon Structure for
MIR2117HG
ECgene alternative splicing isoforms for
MIR2117HG

Expression for MIR2117HG Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR2117HG Gene:

MIR2117HG
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR2117HG Gene

Orthologs for MIR2117HG Gene

Evolution for MIR2117HG Gene

ENSEMBL:
Gene Tree for MIR2117HG (if available)
TreeFam:
Gene Tree for MIR2117HG (if available)

No data available for Orthologs for MIR2117HG Gene

Paralogs for MIR2117HG Gene

No data available for Paralogs for MIR2117HG Gene

Variants for MIR2117HG Gene

Additional Variant Information for MIR2117HG Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR2117HG

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR2117HG Gene

Disorders for MIR2117HG Gene

Additional Disease Information for MIR2117HG

No disorders were found for MIR2117HG Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR2117HG Gene

Publications for MIR2117HG Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58

Products for MIR2117HG Gene

Sources for MIR2117HG Gene

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