Aliases for MIR210HG Gene

Subcategory (RNA class) for MIR210HG Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for MIR210HG Gene

  • MIR210 Host Gene 2 3 5
  • MIR210 Host Gene (Non-Protein Coding) 2 3
  • MIR210HG 2 168
  • NONHSAG007324 92
  • HSALNG0081992 167

External Ids for MIR210HG Gene

Previous GeneCards Identifiers for MIR210HG Gene

  • GC11M000567
  • GC11M000571
  • GC11M000574
  • GC11M000577
  • GC11M000580
  • GC11M000579
  • GC11M000583
  • GC11M000604
  • GC11M000609
  • GC11M000586
  • GC11M000590
  • GC11M000592
  • GC11M000594
  • GC11M000596
  • GC11M000598
  • GC11M000600
  • GC11M000576

Summaries for MIR210HG Gene

GeneCards Summary for MIR210HG Gene

MIR210HG (MIR210 Host Gene) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with MIR210HG include Osteogenic Sarcoma.

Rfam classification for MIR210HG Gene

Additional gene information for MIR210HG Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for MIR210HG Gene

Genomics for MIR210HG Gene

GeneHancer (GH) Regulatory Elements for MIR210HG Gene

Promoters and enhancers for MIR210HG Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J000566 Promoter/Enhancer 1.8 Ensembl ENCODE CraniofacialAtlas 500.7 -0.9 -873 5 HNRNPK ZBTB40 EP300 SIN3A NRF1 POLR2G SP1 PHF8 JUND SIX5 MIR210 MIR210HG HRAS TMEM80 LRRC56 PHRF1 RNH1 ENSG00000270105 lnc-PHRF1-1
GH11J000559 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +5.6 5563 7.5 SIN3A TCF12 POLR2G SP1 GTF2E2 PHF8 TEAD4 FOS ZFX ZIC2 LMNTD2 RASSF7 NONHSAG007323.2 TMEM80 SNORA52 TSPAN4 RNH1 RPLP2 PHRF1 ENSG00000255237
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR210HG on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR210HG Gene

Genomic Locations for MIR210HG Gene
chr11:563,690-568,478
(GRCh38/hg38)
Size:
4,789 bases
Orientation:
Minus strand
chr11:565,657-568,457
(GRCh37/hg19)
Size:
2,801 bases
Orientation:
Minus strand

Genomic View for MIR210HG Gene

Genes around MIR210HG on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR210HG Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR210HG Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR210HG Gene

Proteins for MIR210HG Gene

Post-translational modifications for MIR210HG Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR210HG Gene

Domains & Families for MIR210HG Gene

Gene Families for MIR210HG Gene

genes like me logo Genes that share domains with MIR210HG: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MIR210HG Gene

Function for MIR210HG Gene

Phenotypes From GWAS Catalog for MIR210HG Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR210HG Gene

Localization for MIR210HG Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for MIR210HG gene
Compartment Confidence
extracellular 1
mitochondrion 1
nucleus 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR210HG Gene

Pathways & Interactions for MIR210HG Gene

PathCards logo

SuperPathways for MIR210HG Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for MIR210HG Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MIR210HG Gene

Drugs & Compounds for MIR210HG Gene

No Compound Related Data Available

Transcripts for MIR210HG Gene

mRNA/cDNA for MIR210HG Gene

15 RNACentral transcripts :
1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
5 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
6 NONCODE transcripts :
11 LncBook transcripts :
13 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR210HG Gene

No ASD Table

Relevant External Links for MIR210HG Gene

GeneLoc Exon Structure for
MIR210HG

Expression for MIR210HG Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR210HG Gene

mRNA differential expression in normal tissues according to GTEx for MIR210HG Gene

This gene is overexpressed in Skin - Sun Exposed (Lower leg) (x4.2), Esophagus - Mucosa (x4.0), and Skin - Not Sun Exposed (Suprapubic) (x4.0).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for MIR210HG

SOURCE GeneReport for Unigene cluster for MIR210HG Gene:

Hs.446388
genes like me logo Genes that share expression patterns with MIR210HG: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR210HG Gene

Orthologs for MIR210HG Gene

Evolution for MIR210HG Gene

ENSEMBL:
Gene Tree for MIR210HG (if available)
TreeFam:
Gene Tree for MIR210HG (if available)

No data available for Orthologs for MIR210HG Gene

Paralogs for MIR210HG Gene

No data available for Paralogs for MIR210HG Gene

Variants for MIR210HG Gene

Additional dbSNP identifiers (rs#s) for MIR210HG Gene

Structural Variations from Database of Genomic Variants (DGV) for MIR210HG Gene

Variant ID Type Subtype PubMed ID
dgv1522n54 CNV loss 21841781
dgv1523n54 CNV gain 21841781
dgv182e199 CNV deletion 23128226
dgv564n106 OTHER inversion 24896259
esv2759794 CNV loss 17122850
nsv1039558 CNV gain 25217958
nsv1053964 CNV gain 25217958
nsv1069991 CNV deletion 25765185
nsv1077764 OTHER inversion 25765185
nsv1126280 CNV deletion 24896259
nsv1136121 CNV deletion 24896259
nsv1159791 CNV deletion 26073780
nsv467634 CNV loss 19166990
nsv467635 CNV loss 19166990
nsv469923 CNV loss 18288195
nsv469924 CNV gain 18288195
nsv518824 CNV loss 19592680
nsv527327 CNV loss 19592680
nsv528415 CNV loss 19592680
nsv552854 CNV loss 21841781
nsv552856 CNV gain 21841781
nsv951270 CNV deletion 24416366

Additional Variant Information for MIR210HG Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR210HG

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for MIR210HG Gene

Disorders for MIR210HG Gene

MalaCards: The human disease database

(1) MalaCards diseases for MIR210HG Gene - From: LncRNADisease

Disorder Aliases PubMed IDs
osteogenic sarcoma
  • osteosarcoma; osrc
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for MIR210HG

genes like me logo Genes that share disorders with MIR210HG: view

No data available for UniProtKB/Swiss-Prot and Genatlas for MIR210HG Gene

Publications for MIR210HG Gene

  1. CRISPRi-based genome-scale identification of functional long noncoding RNA loci in human cells. (PMID: 27980086) Liu SJ … Lim DA (Science (New York, N.Y.) 2017) 2 3 54
  2. Long Noncoding RNA miR210HG as a Potential Biomarker for the Diagnosis of Glioma. (PMID: 27673330) Min W … Yue Z (PloS one 2016) 2 3 54
  3. The long noncoding RNA landscape in hypoxic and inflammatory renal epithelial injury. (PMID: 26400545) Lin J … Reilly MP (American journal of physiology. Renal physiology 2015) 2 3 54
  4. Long Noncoding RNA miR210HG Sponges miR-503 to Facilitate Osteosarcoma Cell Invasion and Metastasis. (PMID: 28972855) Li J … Zhang CQ (DNA and cell biology 2017) 3 54
  5. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 54

Products for MIR210HG Gene

Sources for MIR210HG Gene