Aliases for MIR205HG Gene

Subcategory (RNA class) for MIR205HG Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for MIR205HG Gene

  • MIR205 Host Gene 2 3 5
  • Long Intergenic Non-Protein Coding RNA 510 2 3
  • MIR205 Host Gene (Non-Protein Coding) 2 3
  • MIR205HG 2 168
  • NONHSAG004163 92
  • HSALNG0010200 167
  • LINC00510 3
  • NPC-A-5 3

External Ids for MIR205HG Gene

Previous GeneCards Identifiers for MIR205HG Gene

  • GC01P209604
  • GC01P209606

Summaries for MIR205HG Gene

GeneCards Summary for MIR205HG Gene

MIR205HG (MIR205 Host Gene) is an RNA Gene, and is affiliated with the lncRNA class.

Rfam classification for MIR205HG Gene

Additional gene information for MIR205HG Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for MIR205HG Gene

Genomics for MIR205HG Gene

GeneHancer (GH) Regulatory Elements for MIR205HG Gene

Promoters and enhancers for MIR205HG Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J209426 Enhancer 0.2 Ensembl 500.7 -1.3 -1330 0.4 MIR205HG MIR205HG-001 lnc-CAMK1G-7
GH01J209644 Promoter/Enhancer 2.1 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 9.3 +225.5 225464 16.6 CTCF NRF1 TCF12 GTF2E2 JUND TEAD4 PHB2 FOS EP300 ZIC2 LAMB3 G0S2 HSD11B1 HSD11B1-AS1 CAMK1G ENSG00000224260 MIR205 MIR205HG IRF6 TRAF3IP3
GH01J209427 Promoter/Enhancer 1.4 Ensembl ENCODE CraniofacialAtlas dbSUPER 13.6 +4.0 4023 8.8 EP300 CTCF TEAD4 POLR2A RAD21 CTBP1 SMC3 DEK ZNF263 FOS 5MWI_A-015 MIR205 MIR205HG MIR205HG-001
GH01J209396 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 12 -25.6 -25629 10.6 TCF12 ZIC2 REST POLR2A EP300 RBM25 FOXA2 ELK1 ZNF316 MAFF MIR205HG MIR205 ENSG00000224260 LAMB3 IRF6 ENSG00000224540 HSD11B1 lnc-CAMK1G-7
GH01J209354 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 11.7 -71.7 -71729 3.6 CTCF POLR2A GABPA RAD21 TRIM22 SMC3 DEK GATA3 FOS WRNIP1 MIR205HG MIR205 ENSG00000224540 ENSG00000224260 LINC01698 IRF6 LAMB3 lnc-CAMK1G-9
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR205HG on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR205HG Gene

Genomic Locations for MIR205HG Gene
chr1:209,427,530-209,433,438
(GRCh38/hg38)
Size:
5,909 bases
Orientation:
Plus strand
chr1:209,602,165-209,606,183
(GRCh37/hg19)
Size:
4,019 bases
Orientation:
Plus strand

Genomic View for MIR205HG Gene

Genes around MIR205HG on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR205HG Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR205HG Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR205HG Gene

Proteins for MIR205HG Gene

Post-translational modifications for MIR205HG Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR205HG Gene

Domains & Families for MIR205HG Gene

genes like me logo Genes that share domains with MIR205HG: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MIR205HG Gene

Function for MIR205HG Gene

Phenotypes From GWAS Catalog for MIR205HG Gene

Phenotypes for MIR205HG Gene

genes like me logo Genes that share phenotypes with MIR205HG: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for MIR205HG

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR205HG Gene

Localization for MIR205HG Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for MIR205HG gene
Compartment Confidence
plasma membrane 1
extracellular 1
cytoskeleton 1
nucleus 1
cytosol 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR205HG Gene

Pathways & Interactions for MIR205HG Gene

PathCards logo

SuperPathways for MIR205HG Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for MIR205HG Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MIR205HG Gene

Drugs & Compounds for MIR205HG Gene

No Compound Related Data Available

Transcripts for MIR205HG Gene

mRNA/cDNA for MIR205HG Gene

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for MIR205HG

Alternative Splicing Database (ASD) splice patterns (SP) for MIR205HG Gene

No ASD Table

Relevant External Links for MIR205HG Gene

GeneLoc Exon Structure for
MIR205HG

Expression for MIR205HG Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR205HG Gene

mRNA differential expression in normal tissues according to GTEx for MIR205HG Gene

This gene is overexpressed in Esophagus - Mucosa (x12.0), Skin - Not Sun Exposed (Suprapubic) (x9.3), Skin - Sun Exposed (Lower leg) (x8.6), Vagina (x6.2), and Prostate (x4.6).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for MIR205HG

SOURCE GeneReport for Unigene cluster for MIR205HG Gene:

Hs.510543
genes like me logo Genes that share expression patterns with MIR205HG: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR205HG Gene

Orthologs for MIR205HG Gene

Evolution for MIR205HG Gene

ENSEMBL:
Gene Tree for MIR205HG (if available)
TreeFam:
Gene Tree for MIR205HG (if available)

No data available for Orthologs for MIR205HG Gene

Paralogs for MIR205HG Gene

No data available for Paralogs for MIR205HG Gene

Variants for MIR205HG Gene

Additional dbSNP identifiers (rs#s) for MIR205HG Gene

Additional Variant Information for MIR205HG Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR205HG

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR205HG Gene

Disorders for MIR205HG Gene

Additional Disease Information for MIR205HG

No disorders were found for MIR205HG Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR205HG Gene

Publications for MIR205HG Gene

  1. Long Non-coding MIR205HG Depletes Hsa-miR-590-3p Leading to Unrestrained Proliferation in Head and Neck Squamous Cell Carcinoma. (PMID: 29556360) Di Agostino S … Blandino G (Theranostics 2018) 2 3 54
  2. miR-205 targets angiogenesis and EMT concurrently in anaplastic thyroid carcinoma. (PMID: 29317480) Vosgha H … Lam AK (Endocrine-related cancer 2018) 3 54
  3. Identification of intrahepatic cholangiocarcinoma related genes by comparison with normal liver tissues using expressed sequence tags. (PMID: 16712791) Wang AG … Kim NS (Biochemical and biophysical research communications 2006) 3 54
  4. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 54
  5. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 54

Products for MIR205HG Gene

Sources for MIR205HG Gene