Free for academic non-profit institutions. Other users need a Commercial license
Aliases for MIR194-2HG Gene
Data sources for MIR194-2HG Gene:
Subcategory (RNA class) for MIR194-2HG Gene
lncRNA
Aliases for MIR194-2HG Gene
- MIR194-2 Host Gene (HGNC, NCBI Entrez Gene, Ensembl)
- MIR194-2HG (Ensembl, LNCipedia)
- Pri-MicroRNA-194-2, -192 (NCBI Entrez Gene)
- NONHSAG008635.2 (NONCODE)
- HSALNG0084833 (LncBook)
External Ids for MIR194-2HG Gene
- HGNC: 51946
- NCBI Entrez Gene: 105369343
- Ensembl: ENSG00000229719
Previous GeneCards Identifiers for MIR194-2HG Gene
- GC11M064890
Summaries for MIR194-2HG Gene
GeneCards Summary for MIR194-2HG Gene
MIR194-2HG (MIR194-2 Host Gene) is an RNA Gene, and is affiliated with the lncRNA class.
Rfam classification for MIR194-2HG Gene
Additional gene information for MIR194-2HG Gene
- HGNC (51946)
- NCBI Entrez Gene (105369343)
- Ensembl (ENSG00000229719)
- Open Targets Platform(ENSG00000229719)
- Search for MIR194-2HG at DataMed
- Search for MIR194-2HG at HumanCyc
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for MIR194-2HG Gene
Genomics for MIR194-2HG Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for MIR194-2HG Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH11J064884 | Promoter/Enhancer | 2.4 | EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER | 250.7 | +3.4 | 3412 | 10.2 | TBP ZBTB10 MXD4 CEBPA NR2C1 MNT DEK IKZF1 SMAD5 IRF2 | EHD1 HSALNG0084832 MIR192 MIR194-2 MIR194-2HG SF1 SYVN1 NEAT1 PLCB3 POLA2 | |
| GH11J064885 | Promoter/Enhancer | 0.5 | Ensembl dbSUPER | 0.4 | +9.7 | 9748 | 0.2 | EHD1 RPS16P6 MIR194-2HG CDC42BPG | ||
| GH11J064881 | Enhancer | 0.3 | dbSUPER | 0.4 | +10.8 | 10799 | 0.6 | KDM1A | RPS16P6 lnc-PPP2R5B-3 EHD1 MIR194-2HG CDC42BPG |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around MIR194-2HG on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for MIR194-2HG Gene
Latest Assembly
- chr11:64,882,820-64,893,449
- (GRCh38/hg38)
- Size:
- 10,630 bases
- Orientation:
- Minus strand
Previous Assembly
- chr11:64,655,930-64,660,921
- (GRCh37/hg19 by Entrez Gene)
- Size:
- 4,992 bases
- Orientation:
- Minus strand
- chr11:64,658,827-64,660,921
- (GRCh37/hg19 by Ensembl)
- Size:
- 2,095 bases
- Orientation:
- Minus strand
Genomic View for MIR194-2HG Gene
Genes around MIR194-2HG on UCSC Golden Path with GeneCards custom track
MIR194-2HG in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path
- Cytogenetic band:
-
- 11q13.1 by HGNC
- 11q13.1 by Entrez Gene
- 11q13.1 by Ensembl
MIR194-2HG Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for MIR194-2HG Gene
Proteins for MIR194-2HG Gene
Post-translational modifications for MIR194-2HG Gene
No Post-translational modifications
No data available for DME Specific Peptides for MIR194-2HG Gene
Domains & Families for MIR194-2HG Gene
Gene Families for MIR194-2HG Gene
No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MIR194-2HG Gene
Function for MIR194-2HG Gene
Phenotypes From GWAS Catalog for MIR194-2HG Gene
CRISPR products for research
Inhibitory RNAs for research
Clone products for research
Cell Lines for research
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR194-2HG Gene
Localization for MIR194-2HG Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR194-2HG Gene
Pathways & Interactions for MIR194-2HG Gene
No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MIR194-2HG Gene
Transcripts for MIR194-2HG Gene
Non-coding RNA (ncRNA) Transcripts from RNAcentral for MIR194-2HG Gene
| RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
|---|---|---|---|---|
| URS00007697E8_9606 | lncRNA | 3647 | 2 |
Ensembl: ENST00000413053 (view in UCSC) , LNCipedia: MIR194-2HG:2, |
| URS00008E3A09_9606 | lncRNA | 2521 | 2 |
RefSeq: NR_133638, LNCipedia: MIR194-2HG:10, |
| URS00008E3A59_9606 | lncRNA | 1320 | 2 |
RefSeq: NR_133639, LNCipedia: MIR194-2HG:12, |
| URS00008E3A49_9606 | lncRNA | 1159 | 2 |
RefSeq: NR_133640, LNCipedia: MIR194-2HG:11, |
| URS00004434C2_9606 | lncRNA | 1783 | 3 |
LncBook: HSALNT0176672, LNCipedia: MIR194-2HG:1, NONCODE: NONHSAT022040.2, |
MIR194-2HG in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path
Additional transcripts not in RNAcentral for MIR194-2HG Gene
- 5 NCBI additional mRNA sequence :
CRISPR products for research
Inhibitory RNAs for research
Clone products for research
Relevant External Links for MIR194-2HG Gene
- GeneLoc Exon Structure for
- MIR194-2HG
Expression for MIR194-2HG Gene
No Expression Related Data Available
Gene Expression Assays for research
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR194-2HG Gene
Orthologs for MIR194-2HG Gene
This gene was present in the common ancestor of chordates.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| Chimpanzee (Pan troglodytes) |
Mammalia | -- 31 |
|
OneToOne | |
| Dog (Canis familiaris) |
Mammalia | -- 31 |
|
OneToOne | |
| Cow (Bos Taurus) |
Mammalia | bta-mir-194-2 31 |
|
OneToOne | |
| Mouse (Mus musculus) |
Mammalia | Mir194-2 31 |
|
OneToOne | |
| Platypus (Ornithorhynchus anatinus) |
Mammalia | oan-mir-194-2 31 |
|
OneToOne | |
| Lizard (Anolis carolinensis) |
Reptilia | aca-mir-194-2 31 |
|
OneToOne | |
| Zebrafish (Danio rerio) |
Actinopterygii | dre-mir-194a 31 |
|
OneToMany | |
| CU138503.6 31 |
|
OneToMany | |||
| dre-mir-194b 31 |
|
OneToMany |
- Species where no ortholog for MIR194-2HG was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Eremothecium gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- Alpha proteobacteria (Wolbachia pipientis)
- Amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- Baker's yeast (Saccharomyces cerevisiae)
- Barley (Hordeum vulgare)
- Beta proteobacteria (Neisseria meningitidis)
- Bread mold (Neurospora crassa)
- Chicken (Gallus gallus)
- Chromalveolata (Phytophthora infestans)
- Common water flea (Daphnia pulex)
- Corn (Zea mays)
- E. coli (Escherichia coli)
- Filamentous fungi (Aspergillus nidulans)
- Firmicute Bacteria (Streptococcus pneumoniae)
- Fission Yeast (Schizosaccharomyces pombe)
- Fruit Fly (Drosophila melanogaster)
- Green Algae (Chlamydomonas reinhardtii)
- Honey Bee (Apis mellifera)
- K. Lactis Yeast (Kluyveromyces lactis)
- Loblloly Pine (Pinus taeda)
- Malaria Parasite (Plasmodium falciparum)
- Medicago Trunc (Medicago Truncatula)
- Moss (Physcomitrella patens)
- Oppossum (Monodelphis domestica)
- Orangutan (Pongo pygmaeus)
- Pig (Sus scrofa)
- Rainbow Trout (Oncorhynchus mykiss)
- Rat (Rattus norvegicus)
- Rice (Oryza sativa)
- Rice Blast Fungus (Magnaporthe grisea)
- Schistosome Parasite (Schistosoma mansoni)
- Sea Anemone (Nematostella vectensis)
- Sea Vase (Ciona intestinalis)
- Sea Squirt (Ciona savignyi)
- Sea Urchin (Strongylocentrotus purpuratus)
- Sorghum (Sorghum bicolor)
- Soybean (Glycine max)
- Stem Rust Fungus (Puccinia graminis)
- Sugarcane (Saccharum officinarum)
- Thale Cress (Arabidopsis thaliana)
- Tomato (Lycopersicon esculentum)
- Toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- Tropical Clawed Frog (Silurana tropicalis)
- Wheat (Triticum aestivum)
- Worm (Caenorhabditis elegans)
Paralogs for MIR194-2HG Gene
No data available for Paralogs for MIR194-2HG Gene
Variants for MIR194-2HG Gene
All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).
Additional Variant Information for MIR194-2HG Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- MIR194-2HG
SNP Genotyping and Copy Number Assays for research
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR194-2HG Gene
Disorders for MIR194-2HG Gene
Additional Disease Information for MIR194-2HG
- Atlas
- ATLAS of Genetics and Cytogenetics in Oncology and Haematology
- Open Targets Platform
- Open Targets Platform
No disorders were found for MIR194-2HG Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR194-2HG Gene
Publications for MIR194-2HG Gene
- miR-194 as predictive biomarker of responsiveness to neoadjuvant chemoradiotherapy in patients with locally advanced rectal adenocarcinoma. (PMID: 28870889) D'Angelo E … Agostini M (Journal of clinical pathology 2018) 3
- miR-194 inhibits the proliferation, invasion, migration, and enhances the chemosensitivity of non-small cell lung cancer cells by targeting forkhead box A1 protein. (PMID: 26909612) Zhu X … Fan L (Oncotarget 2016) 3
- MicroRNA-194 acts as a prognostic marker and inhibits proliferation in hepatocellular carcinoma by targeting MAP4K4. (PMID: 26722431) Zhao Y … Zhao P (International journal of clinical and experimental pathology 2015) 3
- Inducible expression of microRNA-194 is regulated by HNF-1alpha during intestinal epithelial cell differentiation. (PMID: 18492795) Hino K … Watanabe M (RNA (New York, N.Y.) 2008) 3
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3
Products for MIR194-2HG Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for MIR194-2HG
- Origene Custom Protein Services for MIR194-2HG
- Browse OriGene Inhibitory RNA Products For MIR194-2HG
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for MIR194-2HG
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For MIR194-2HG
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for MIR194-2HG
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for MIR194-2HG
- Search GeneCopoeia for miRNA 3'UTR Target clone products for MIR194-2HG
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for MIR194-2HG
Sources for MIR194-2HG Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB