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Aliases for MIR193BHG Gene

Subcategory (RNA class) for MIR193BHG Gene

miRNA

Quality Score for this RNA gene is

13

Aliases for MIR193BHG Gene

  • MIR193B Host Gene 2 3 5

External Ids for MIR193BHG Gene

Summaries for MIR193BHG Gene

GeneCards Summary for MIR193BHG Gene

MIR193BHG (MIR193B Host Gene) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR193BHG Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR193BHG Gene

Genomics for MIR193BHG Gene

GeneHancer (GH) Regulatory Elements for MIR193BHG Gene

Promoters and enhancers for MIR193BHG Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J014299 Enhancer 1 Ensembl ENCODE 600.7 -1.7 -1689 0.6 ELF3 SP5 KAT8 ZBTB33 GATAD2A RCOR2 SCRT2 KAT7 HDAC2 FOXA2 MIR193BHG TRT-CGT2-1
GH16J014300 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE dbSUPER 31.9 +4.8 4809 10.9 ZNF652 SP1 ZFX ELF3 CTCF MNT ZNF148 NKRF MLLT1 ZNF121 GC16P014304 MIR193BHG NPIPP1 MRTFB GC16P014303 MIR193B MIR365A
GH16J014318 Enhancer 1.3 Ensembl ENCODE dbSUPER 18.6 +17.1 17141 0.9 ZNF652 ELF3 CEBPG AHR TFE3 SP1 PPARG SP5 ZNF384 ZNF644 MIR193BHG PKD1P6 GC16P014313 GC16M014339
GH16J014315 Enhancer 0.7 dbSUPER 23 +14.9 14899 1.3 ZNF652 CEBPG ZNF384 GATAD2A ZNF205 TEAD1 CEBPB HNF4A ATM ZBTB40 MIR193BHG GC16P014313 GC16M014339
GH16J014323 Enhancer 0.6 dbSUPER 22.8 +22.5 22539 1.8 ZNF121 ZNF384 NFIB ZNF544 PRDM10 ZBTB44 ZNF491 NFIC ZNF195 KLF10 MIR193BHG ENSG00000183458 GC16P014313 GC16M014339
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR193BHG on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR193BHG Gene

Genomic Locations for MIR193BHG Gene
chr16:14,301,389-14,331,067
(GRCh38/hg38)
Size:
29,679 bases
Orientation:
Plus strand
chr16:14,396,145-14,420,374
(GRCh37/hg19)
Size:
24,230 bases
Orientation:
Plus strand

Genomic View for MIR193BHG Gene

Genes around MIR193BHG on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR193BHG Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR193BHG Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR193BHG Gene

Proteins for MIR193BHG Gene

Post-translational modifications for MIR193BHG Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR193BHG Gene

Domains & Families for MIR193BHG Gene

Gene Families for MIR193BHG Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR193BHG: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR193BHG Gene

Function for MIR193BHG Gene

Phenotypes From GWAS Catalog for MIR193BHG Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR193BHG Gene

Localization for MIR193BHG Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR193BHG Gene

Pathways & Interactions for MIR193BHG Gene

PathCards logo

SuperPathways for MIR193BHG Gene

No Data Available

Interacting Proteins for MIR193BHG Gene

Gene Ontology (GO) - Biological Process for MIR193BHG Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR193BHG Gene

Drugs & Compounds for MIR193BHG Gene

No Compound Related Data Available

Transcripts for MIR193BHG Gene

mRNA/cDNA for MIR193BHG Gene

(2) Additional mRNA sequences :
(17) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(19) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR193BHG Gene

No ASD Table

Relevant External Links for MIR193BHG Gene

GeneLoc Exon Structure for
MIR193BHG
ECgene alternative splicing isoforms for
MIR193BHG

Expression for MIR193BHG Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR193BHG Gene:

MIR193BHG
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR193BHG Gene

Orthologs for MIR193BHG Gene

Evolution for MIR193BHG Gene

ENSEMBL:
Gene Tree for MIR193BHG (if available)
TreeFam:
Gene Tree for MIR193BHG (if available)

No data available for Orthologs for MIR193BHG Gene

Paralogs for MIR193BHG Gene

No data available for Paralogs for MIR193BHG Gene

Variants for MIR193BHG Gene

Sequence variations from dbSNP and Humsavar for MIR193BHG Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1000058100 -- 14,301,362(+) C/T upstream_transcript_variant
rs1000091155 -- 14,311,820(+) A/C intron_variant
rs1000101290 -- 14,326,630(+) C/T downstream_transcript_variant
rs1000129948 -- 14,301,841(+) G/C/T upstream_transcript_variant
rs1000177034 -- 14,315,368(+) T/G intron_variant

Additional Variant Information for MIR193BHG Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR193BHG

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR193BHG Gene

Disorders for MIR193BHG Gene

Additional Disease Information for MIR193BHG

No disorders were found for MIR193BHG Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR193BHG Gene

Publications for MIR193BHG Gene

  1. Genome-wide association study of sexual maturation in males and females highlights a role for body mass and menarche loci in male puberty. (PMID: 24770850) Cousminer DL … Early Growth Genetics Consortium (Human molecular genetics 2014) 3 58
  2. Genetic association study of QT interval highlights role for calcium signaling pathways in myocardial repolarization. (PMID: 24952745) Arking DE … Newton-Cheh C (Nature genetics 2014) 3 58
  3. Parent-of-origin-specific allelic associations among 106 genomic loci for age at menarche. (PMID: 25231870) Perry JR … Ong KK (Nature 2014) 3 58
  4. Expressed sequence tag analysis of adult human lens for the NEIBank Project: over 2000 non-redundant transcripts, novel genes and splice variants. (PMID: 12107413) Wistow G … Peterson K (Molecular vision 2002) 3 58
  5. Creation of genome-wide protein expression libraries using random activation of gene expression. (PMID: 11329013) Harrington JJ … Ducar M (Nature biotechnology 2001) 3 58

Products for MIR193BHG Gene

Sources for MIR193BHG Gene

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