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Aliases for MIR181A1 Gene

Subcategory (RNA class) for MIR181A1 Gene


Quality Score for this RNA gene is


Aliases for MIR181A1 Gene

  • MicroRNA 181a-1 2 3 5
  • MicroRNA 213 2 3
  • Hsa-Mir-181a-1 3
  • Hsa-Mir-213 3
  • Mir-181a-1 3
  • MIRN181A1 3
  • Mir-213 3
  • MIRN213 3
  • MIR213 3

External Ids for MIR181A1 Gene

Previous HGNC Symbols for MIR181A1 Gene

  • MIRN213
  • MIRN181A1

Previous GeneCards Identifiers for MIR181A1 Gene

  • GC01M197097
  • GC01M198829
  • GC01M198830
  • GC01M198831
  • GC01M198836

Summaries for MIR181A1 Gene

Entrez Gene Summary for MIR181A1 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR181A1 Gene

MIR181A1 (MicroRNA 181a-1) is an RNA Gene, and is affiliated with the miRNA class. Among its related pathways are Hematopoietic Stem Cell Differentiation and miRNAs involved in DNA damage response.

fRNAdb sequence ontologies for MIR181A1 Gene - the ORGUL cluster for this gene includes several descriptions:

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

  • pre_miRNA: The 60-70 nucleotide region remain after Drosha processing of the primary transcript, that folds back upon itself to form a hairpin sructure.

View fRNAdb secondary structures for MIR181A1

Additional gene information for MIR181A1 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for MIR181A1 Gene

Genomics for MIR181A1 Gene

GeneHancer (GH) Regulatory Elements for MIR181A1 Gene

Promoters and enhancers for MIR181A1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I198879 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 11.6 -21.7 -21671 2.8 ZNF493 ZFP64 BRCA1 ZNF213 ZNF302 FOS ZNF214 DEK ZNF202 ZC3H11A MIR181A1 MIR181B1 LOC105371679 PTPRC GC01P198890 GC01P198860 MIR181A1HG
GH01I198890 Enhancer 1.2 Ensembl ENCODE dbSUPER 11.4 -33.1 -33052 4.1 ZNF792 JUN FEZF1 BMI1 GATA3 ZNF316 POLR2A FOSL2 FOS MAFK GC01P198890 LOC105371679 MIR181B1 MIR181A1 GC01P198909 MIR181A1HG
GH01I198918 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 10.6 -60.6 -60634 2 ZNF217 POLR2A JUN CREB1 JUNB RUNX3 MIR181A1 MIR181B1 PTPRC GC01P198915 MIR181A1HG
GH01I198921 Enhancer 1.1 Ensembl ENCODE dbSUPER 10.6 -63.4 -63448 1.6 PKNOX1 BACH1 JUNB EBF1 DPF2 BATF ATF2 ZNF592 ZNF217 IKZF1 MIR181A1 MIR181B1 GC01P198915 MIR181A1HG
GH01I198775 Enhancer 0.9 Ensembl ENCODE 10.4 +82.2 82175 2.8 CTCF USF1 ZNF792 JUN FEZF1 RELA ZNF324 POLR2A FOS RUNX3 MIR181A1 MIR181B1 GC01M198840 PIR61364 GC01P198684
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR181A1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR181A1 Gene

Genomic Locations for MIR181A1 Gene
110 bases
Minus strand

Genomic View for MIR181A1 Gene

Genes around MIR181A1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR181A1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR181A1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR181A1 Gene

ORGUL Member Location for MIR181A1 Gene

ORGUL Member Location for MIR181A1 gene

Proteins for MIR181A1 Gene

Post-translational modifications for MIR181A1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR181A1 Gene

Domains & Families for MIR181A1 Gene

Gene Families for MIR181A1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR181A1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR181A1 Gene

Function for MIR181A1 Gene

Phenotypes From GWAS Catalog for MIR181A1 Gene

Gene Ontology (GO) - Molecular Function for MIR181A1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:1903231 mRNA binding involved in posttranscriptional gene silencing IMP 23993976
genes like me logo Genes that share ontologies with MIR181A1: view

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR181A1 Gene

Localization for MIR181A1 Gene

Gene Ontology (GO) - Cellular Components for MIR181A1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005615 extracellular space IDA 26322847
GO:0045177 apical part of cell IDA 26322847
genes like me logo Genes that share ontologies with MIR181A1: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for MIR181A1 Gene

Pathways & Interactions for MIR181A1 Gene

genes like me logo Genes that share pathways with MIR181A1: view

Interacting Proteins for MIR181A1 Gene

Gene Ontology (GO) - Biological Process for MIR181A1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0010629 negative regulation of gene expression IGI 18728182
GO:0030335 positive regulation of cell migration IMP 23993976
GO:0035195 gene silencing by miRNA IMP 23993976
GO:0035278 miRNA mediated inhibition of translation IMP 23993976
GO:1900745 positive regulation of p38MAPK cascade IMP 23993976
genes like me logo Genes that share ontologies with MIR181A1: view

No data available for SIGNOR curated interactions for MIR181A1 Gene

Drugs & Compounds for MIR181A1 Gene

No Compound Related Data Available

Transcripts for MIR181A1 Gene

fRNAdb Secondary structures for MIR181A1 Gene

  • hsa-miR-181a-5p_MIMAT0000256_Homo_sapiens_miR-181a-5p_mature
  • FR284577

mRNA/cDNA for MIR181A1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR181A1 Gene

No ASD Table

Relevant External Links for MIR181A1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR181A1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR181A1 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR181A1 Gene:

genes like me logo Genes that share expression patterns with MIR181A1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR181A1 Gene

Orthologs for MIR181A1 Gene

This gene was present in the common ancestor of chordates.

Orthologs for MIR181A1 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia ptr-mir-181a-1 34
  • 100 (a)
(Monodelphis domestica)
Mammalia mdo-mir-181a-1 34
  • 98 (a)
(Canis familiaris)
Mammalia cfa-mir-181a-1 34
  • 97 (a)
(Mus musculus)
Mammalia Mir181a-1 34
  • 97 (a)
(Bos Taurus)
Mammalia bta-mir-181a-1 34
  • 93 (a)
(Ornithorhynchus anatinus)
Mammalia oan-mir-181a-1 34
  • 68 (a)
(Gallus gallus)
Aves gga-mir-181a-1 34
  • 87 (a)
(Anolis carolinensis)
Reptilia aca-mir-181a-1 34
  • 73 (a)
(Danio rerio)
Actinopterygii dre-mir-181a-1 34
  • 82 (a)
CU571393.1 34
  • 81 (a)
Species where no ortholog for MIR181A1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for MIR181A1 Gene

Gene Tree for MIR181A1 (if available)
Gene Tree for MIR181A1 (if available)

Paralogs for MIR181A1 Gene

No data available for Paralogs for MIR181A1 Gene

Variants for MIR181A1 Gene

Sequence variations from dbSNP and Humsavar for MIR181A1 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000285651 -- 198,860,897(-) T/C upstream_transcript_variant
rs1000647972 -- 198,859,678(-) G/A upstream_transcript_variant
rs1001018666 -- 198,859,400(-) A/G upstream_transcript_variant
rs1002441028 -- 198,860,154(-) T/C upstream_transcript_variant
rs1003141961 -- 198,861,150(-) C/T upstream_transcript_variant

Additional Variant Information for MIR181A1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR181A1 Gene

Disorders for MIR181A1 Gene

Additional Disease Information for MIR181A1

No disorders were found for MIR181A1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR181A1 Gene

Publications for MIR181A1 Gene

  1. New human and mouse microRNA genes found by homology search. (PMID: 15634332) Weber MJ (The FEBS journal 2005) 1 3 58
  2. Numerous microRNPs in neuronal cells containing novel microRNAs. (PMID: 12554860) Dostie J … Dreyfuss G (RNA (New York, N.Y.) 2003) 1 3 58
  3. Vertebrate microRNA genes. (PMID: 12624257) Lim LP … Bartel DP (Science (New York, N.Y.) 2003) 1 3 58
  4. MicroRNA-181 contributes to downregulation of SAMHD1 expression in CD4+ T-cells derived from Sèzary syndrome patients. (PMID: 27889686) Kohnken R … Wu L (Leukemia research 2017) 3 58
  5. miRNA-181a/b Regulates Phenotypes of Vessel Smooth Muscle Cells Through Serum Response Factor. (PMID: 27911586) Wei X … Liu Y (DNA and cell biology 2017) 3 58

Products for MIR181A1 Gene

Sources for MIR181A1 Gene

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