Aliases for MIR155HG Gene
Subcategory (RNA class) for MIR155HG Gene
miRNA
Quality Score for this RNA gene is
3
Aliases for MIR155HG Gene
External Ids for MIR155HG Gene
- HGNC: 35460
- Entrez Gene: 114614
- Ensembl: ENSG00000234883
Previous HGNC Symbols for MIR155HG Gene
- MIRHG2
Previous GeneCards Identifiers for MIR155HG Gene
- GC21P025873
- GC21P026934
- GC21P012337
Summaries for MIR155HG Gene
-
This gene represents a microRNA host gene. The long RNA transcribed from this gene is expressed at high levels in lymphoma and may function as an oncogene. [provided by RefSeq, Dec 2017]
GeneCards Summary for MIR155HG Gene
MIR155HG (MIR155 Host Gene) is an RNA Gene, and is affiliated with the miRNA class. Diseases associated with MIR155HG include Periodic Limb Movement Disorder.
Additional gene information for MIR155HG Gene
No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR155HG Gene
Genomics for MIR155HG Gene
GeneHancer (GH) Regulatory Elements for MIR155HG Gene
Promoters and enhancers for MIR155HG Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH21I025561 | Promoter/Enhancer | 1.5 | Ensembl ENCODE dbSUPER | 550.8 | +0.8 | 773 | 3 | SMAD1 RB1 BATF RAD21 KLF5 IRF4 ZNF207 ZNF143 ATF7 ETV6 | MIR155HG MRPL39 GC21P025574 | |
| GH21I025559 | Enhancer | 1.1 | FANTOM5 Ensembl ENCODE dbSUPER | 550.8 | -1.6 | -1608 | 1 | POLR2A CEBPA CEBPB | MIR155HG LOC105372753 | |
| GH21I025420 | Enhancer | 1.3 | FANTOM5 Ensembl ENCODE | 11.7 | -138.6 | -138566 | 4.8 | HDGF PKNOX1 SMAD1 BMI1 BATF IRF4 RAD21 ZNF143 ATF7 ETV6 | MIR155HG MIR155 MRPL39 GC21M025430 LINC00158 GC21M025409 | |
| GH21I025456 | Enhancer | 1.3 | FANTOM5 Ensembl ENCODE | 11.3 | -104.3 | -104347 | 2.6 | SMAD1 BMI1 BATF KLF5 IRF4 ATF7 ETV6 BCLAF1 IKZF2 RUNX3 | LINC00158 MIR155HG MIR155 MRPL39 GC21M025492 | |
| GH21I025486 | Enhancer | 1.1 | FANTOM5 ENCODE | 11.3 | -74.7 | -74681 | 0.8 | PKNOX1 SMAD1 BMI1 BATF KLF5 IRF4 ATF7 ETV6 BCLAF1 IKZF2 | MIR155HG MRPL39 GC21M025492 LINC00158 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around MIR155HG on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for MIR155HG Gene
Genomic Locations for MIR155HG Gene
- chr21:25,561,909-25,575,168
- (GRCh38/hg38)
- Size:
- 13,260 bases
- Orientation:
- Plus strand
- chr21:26,934,221-26,947,480
- (GRCh37/hg19)
Genomic View for MIR155HG Gene
Genes around MIR155HG on UCSC Golden Path with GeneCards custom track
MIR155HG Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for MIR155HG Gene
Proteins for MIR155HG Gene
Post-translational modifications for MIR155HG Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for MIR155HG
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for MIR155HG
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- Search GeneTex for Proteins for MIR155HG
No data available for DME Specific Peptides for MIR155HG Gene
Domains & Families for MIR155HG Gene
Gene Families for MIR155HG Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR155HG Gene
Function for MIR155HG Gene
Phenotypes From GWAS Catalog for MIR155HG Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
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-
- Search ViGene Biosciences for MIR155HG
CRISPR Products
- Browse CRISPR knockouts for MIR155HG
- Applied Biological Materials CRISPR for MIR155HG
-
Vectors and viruses for KO, Activation, Repression, and more
miRNA Products
- Search ViGene Biosciences for MIR155HG
Inhibitory RNA Products
- Search ViGene Biosciences for MIR155HG
Clone Products
- GenScript: Custom all cDNA clones Services for MIR155HG
- VectorBuilder custom plasmid, inducible vectors for MIR155HG
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-
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- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Applied Biological Materials Clones for MIR155HG
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR155HG Gene
Localization for MIR155HG Gene
| Compartment | Confidence |
|---|---|
| extracellular | 2 |
| nucleus | 2 |
| mitochondrion | 1 |
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR155HG Gene
Transcripts for MIR155HG Gene
mRNA/cDNA for MIR155HG Gene
- (3) Additional mRNA sequences :
- (48) Selected AceView cDNA sequences:
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
Unigene Clusters for MIR155HG Gene
CRISPR Products
- Browse CRISPR knockouts for MIR155HG
- Applied Biological Materials CRISPR for MIR155HG
-
Vectors and viruses for KO, Activation, Repression, and more
miRNA Products
- Search ViGene Biosciences for MIR155HG
Inhibitory RNA Products
- Search ViGene Biosciences for MIR155HG
Clone Products
- GenScript: Custom all cDNA clones Services for MIR155HG
- VectorBuilder custom plasmid, inducible vectors for MIR155HG
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for MIR155HG
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Applied Biological Materials Clones for MIR155HG
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
Expression for MIR155HG Gene
NURSA nuclear receptor signaling pathways regulating expression of MIR155HG Gene:
MIR155HGSOURCE GeneReport for Unigene cluster for MIR155HG Gene:
Hs.697120Evidence on tissue expression from TISSUES for MIR155HG Gene
- Nervous system(2.1)
- Bone(2)
Primer Products
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR155HG Gene
Orthologs for MIR155HG Gene
This gene was present in the common ancestor of chordates.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| chimpanzee (Pan troglodytes) |
Mammalia | ptr-mir-155 34 |
|
OneToOne | |
| dog (Canis familiaris) |
Mammalia | cfa-mir-155 34 |
|
OneToOne | |
| cow (Bos Taurus) |
Mammalia | bta-mir-155 34 |
|
OneToOne | |
| mouse (Mus musculus) |
Mammalia | Mir155 34 |
|
OneToOne | |
| oppossum (Monodelphis domestica) |
Mammalia | -- 34 |
|
OneToOne | |
| platypus (Ornithorhynchus anatinus) |
Mammalia | oan-mir-155 34 |
|
OneToOne | |
| chicken (Gallus gallus) |
Aves | gga-mir-155 34 |
|
OneToOne | |
| lizard (Anolis carolinensis) |
Reptilia | aca-mir-155 34 |
|
OneToOne | |
| zebrafish (Danio rerio) |
Actinopterygii | dre-mir-155 34 |
|
OneToOne | |
| sea squirt (Ciona savignyi) |
Ascidiacea | csa-mir-155 34 |
|
OneToOne |
- Species where no ortholog for MIR155HG was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- baker's yeast (Saccharomyces cerevisiae)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- fruit fly (Drosophila melanogaster)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- rainbow trout (Oncorhynchus mykiss)
- rat (Rattus norvegicus)
- rice (Oryza sativa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- thale cress (Arabidopsis thaliana)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- tropical clawed frog (Silurana tropicalis)
- wheat (Triticum aestivum)
- worm (Caenorhabditis elegans)
Paralogs for MIR155HG Gene
No data available for Paralogs for MIR155HG Gene
Variants for MIR155HG Gene
| SNP ID | Clin | Chr 21 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000011975 | -- | 25,568,064(+) | T/C | intron_variant | |
| rs1000043691 | -- | 25,570,927(+) | T/C | intron_variant | |
| rs1000118734 | -- | 25,560,523(+) | C/G | upstream_transcript_variant | |
| rs1000971287 | -- | 25,574,213(+) | G/T | non_coding_transcript_variant | |
| rs1001061915 | -- | 25,568,919(+) | T/G | intron_variant |
Additional Variant Information for MIR155HG Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- MIR155HG
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR155HG Gene
Disorders for MIR155HG Gene
| Disorder | Aliases | PubMed IDs |
|---|---|---|
| periodic limb movement disorder |
|
|
Search MIR155HG in MalaCards
View complete list of genes associated with diseases
Additional Disease Information for MIR155HG
- Genetic Association Database
- (GAD)
- Human Genome Epidemiology Navigator
- (HuGE)
- ATLAS of Genetics and Cytogenetics in Oncology and Haematology
No data available for UniProtKB/Swiss-Prot and Genatlas for MIR155HG Gene
Publications for MIR155HG Gene
- Regulation of the MIR155 host gene in physiological and pathological processes. (PMID: 23246696) Elton TS … Parinandi NL (Gene 2013) 2 3 58
- MYB transcriptionally regulates the miR-155 host gene in chronic lymphocytic leukemia. (PMID: 21296997) Vargova K … Stopka T (Blood 2011) 2 3 58
- Genetic susceptibility to distinct bladder cancer subphenotypes. (PMID: 19692168) Guey LT … EPICURO/Spanish Bladder Cancer Study investigators (European urology 2010) 3 44 58
- PTEN identified as important risk factor of chronic obstructive pulmonary disease. (PMID: 19625176) Hosgood HD … Lan Q (Respiratory medicine 2009) 3 44 58
- Whole transcriptome analysis reveals dysregulated oncogenic lncRNAs in natural killer/T-cell lymphoma and establishes MIR155HG as a target of PRDM1. (PMID: 28468592) Baytak E … Küçük C (Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine 2017) 3 58
Products for MIR155HG Gene
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- Cyagen custom Knockout/knockin (KOKI) mouse models for MIR155HG
- VectorBuilder custom plasmid, inducible vectors for MIR155HG
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for MIR155HG
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneTex for Antibodies for MIR155HG
- Search GeneTex for Proteins for MIR155HG
- Search ViGene Biosciences for MIR155HG
Sources for MIR155HG Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
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- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
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- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
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- (133) ENCODE
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- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew
- (158) Applied Biosystems