microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The ... See more...

Aliases for MIR1302-4 Gene

Subcategory (RNA class) for MIR1302-4 Gene

miRNA

Number of RNA Genes sources:

5 / 14

Aliases for MIR1302-4 Gene

  • MicroRNA 1302-4 2 3 5
  • Hsa-MiR-1302 166 177
  • Hsa-Mir-1302-4 3
  • MIMAT0005890 51
  • MIRN1302-4 3
  • MIR1302-4 2
  • MI0006365 51
  • RF00951 172

External Ids for MIR1302-4 Gene

Previous HGNC Symbols for MIR1302-4 Gene

  • MIRN1302-4

Previous GeneCards Identifiers for MIR1302-4 Gene

  • GC00U923072
  • GC02M207843
  • GC02M208133

Summaries for MIR1302-4 Gene

Entrez Gene Summary for MIR1302-4 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR1302-4 Gene

MIR1302-4 (MicroRNA 1302-4) is an RNA Gene, and is affiliated with the miRNA class.

Rfam classification for MIR1302-4 Gene

Additional gene information for MIR1302-4 Gene

No data available for CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for MIR1302-4 Gene

Genomics for MIR1302-4 Gene

GeneHancer (GH) Regulatory Elements for MIR1302-4 Gene

Promoters and enhancers for MIR1302-4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J207269 Enhancer 0.4 Ensembl 500.7 -0.2 -177 0.4 HNF4A TRIM28 GATA3 MIR1302-4 LINC01802 lnc-CREB1-9 ENSG00000223725
GH02J207268 Enhancer 0.2 Ensembl 500.7 +1.3 1323 0.2 MIR1302-4 LINC01802 ENSG00000223725
GH02J207161 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 10.8 +105.2 105167 7.7 EP300 FOXK2 ZNF217 SIN3A NRF1 TCF12 USF1 POLR2G SP1 NCOR1 KLF7 MYOSLID lnc-MDH1B-8 MIR1302-4 CREB1 ENSG00000240440 ENSG00000234902 METTL21A MIR7845 NONHSAG030356.2
GH02J207140 Promoter/Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 11.6 +126.4 126448 4.7 ZIC2 TRIM28 CTCF RAD21 OSR2 NR2F2 ZNF384 ZKSCAN1 POLR2A REST KLF7 MIR2355 MIR1302-4 CREB1 METTL21A KLF7-IT1 MYOSLID lnc-MDH1B-8
GH02J207225 Promoter/Enhancer 1.3 Ensembl ENCODE CraniofacialAtlas dbSUPER 11.8 +42.4 42428 2.4 HDAC2 TCF12 YY1 POLR2A BATF FOS EBF1 ZSCAN16 SIN3A GATA2 ENSG00000225916 MIR1302-4 KLF7 DYTN ENSG00000240440 ENSG00000234902 MYOSLID-AS1 MYOSLID
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR1302-4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR1302-4 Gene

Genomic Locations for MIR1302-4 Gene
chr2:207,269,275-207,269,424
(GRCh38/hg38)
Size:
150 bases
Orientation:
Minus strand
chr2:208,133,999-208,134,148
(GRCh37/hg19)
Size:
150 bases
Orientation:
Minus strand

Genomic View for MIR1302-4 Gene

Genes around MIR1302-4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR1302-4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR1302-4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR1302-4 Gene

Proteins for MIR1302-4 Gene

Post-translational modifications for MIR1302-4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR1302-4 Gene

Domains & Families for MIR1302-4 Gene

Gene Families for MIR1302-4 Gene

genes like me logo Genes that share domains with MIR1302-4: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MIR1302-4 Gene

Function for MIR1302-4 Gene

Phenotypes From GWAS Catalog for MIR1302-4 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR1302-4 Gene

Localization for MIR1302-4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR1302-4 Gene

Pathways & Interactions for MIR1302-4 Gene

PathCards logo

SuperPathways for MIR1302-4 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for MIR1302-4 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MIR1302-4 Gene

Drugs & Compounds for MIR1302-4 Gene

No Compound Related Data Available

Transcripts for MIR1302-4 Gene

mRNA/cDNA for MIR1302-4 Gene

3 RNACentral transcripts :
11 REFSEQ mRNAs :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 miRBase transcripts :
13 ENA transcripts :
1 LncBase transcripts :
1 Rfam transcripts :
1 TarBase transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR1302-4 Gene

No ASD Table

Relevant External Links for MIR1302-4 Gene

GeneLoc Exon Structure for
MIR1302-4

Expression for MIR1302-4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR1302-4 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for MIR1302-4

genes like me logo Genes that share expression patterns with MIR1302-4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR1302-4 Gene

Orthologs for MIR1302-4 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for MIR1302-4 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 31
  • 77 (a)
ManyToMany
Species where no ortholog for MIR1302-4 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MIR1302-4 Gene

ENSEMBL:
Gene Tree for MIR1302-4 (if available)
TreeFam:
Gene Tree for MIR1302-4 (if available)

Paralogs for MIR1302-4 Gene

No data available for Paralogs for MIR1302-4 Gene

Variants for MIR1302-4 Gene

Additional dbSNP identifiers (rs#s) for MIR1302-4 Gene

Additional Variant Information for MIR1302-4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR1302-4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR1302-4 Gene

Disorders for MIR1302-4 Gene

Additional Disease Information for MIR1302-4

No disorders were found for MIR1302-4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR1302-4 Gene

Publications for MIR1302-4 Gene

  1. Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells. (PMID: 18285502) Morin RD … Marra MA (Genome research 2008) 3 54
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 54

Products for MIR1302-4 Gene

Sources for MIR1302-4 Gene