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Aliases for MIR1260A Gene

Subcategory (RNA class) for MIR1260A Gene


Quality Score for this RNA gene is


Aliases for MIR1260A Gene

  • MicroRNA 1260a 2 3 5
  • MicroRNA 1260 2 3
  • Hsa-Mir-1260a 3
  • Hsa-Mir-1260 3
  • Mir-1260a 3
  • MIRN1260 3
  • MIR1260 3

External Ids for MIR1260A Gene

Previous HGNC Symbols for MIR1260A Gene

  • MIRN1260
  • MIR1260

Previous GeneCards Identifiers for MIR1260A Gene

  • GC14P077733

Summaries for MIR1260A Gene

Entrez Gene Summary for MIR1260A Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR1260A Gene

MIR1260A (MicroRNA 1260a) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR1260A Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR1260A Gene

Genomics for MIR1260A Gene

GeneHancer (GH) Regulatory Elements for MIR1260A Gene

Promoters and enhancers for MIR1260A Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14I077301 Enhancer 1.4 Ensembl ENCODE dbSUPER 11.2 +38.9 38865 6.5 PKNOX1 ATF1 FOXA2 ARID4B SIN3A FEZF1 ZNF2 ZNF207 ATF7 FOS VIPAS39 IRF2BPL GSTZ1 ALKBH1 NGB MIR1260A ZDHHC22 ENSG00000201384 SAMD15 TMED8
GH14I077208 Enhancer 1.1 ENCODE dbSUPER 11.5 -57.3 -57325 0.2 ZFP64 ARID4B SIN3A ZNF48 SLC30A9 ZNF143 DEK SP5 MXD4 MIER2 MIR1260A NGB TMEM63C GC14M077202 ENSG00000201384 ENSG00000259164
GH14I077299 Enhancer 0.9 ENCODE dbSUPER 11.2 +34.4 34412 2.4 CTCF FOXA2 NFIB ARID4B SIN3A RAD21 ARID2 ZNF143 SMC3 NR2F6 GSTZ1 POMT2 NGB MIR1260A ZDHHC22 ENSG00000201384 VIPAS39 AHSA1 CIPC PIR44060
GH14I077133 Enhancer 0.8 ENCODE 10.2 -132.3 -132275 0.2 ELF3 MLX ARID4B SIN3A ZNF48 ZSCAN9 RARA SLC30A9 ZNF766 ZNF143 CIPC ENSG00000201384 NGB MIR1260A SAMD15 TMED8 ENSG00000269883 ZDHHC22 TMEM63C ENSG00000259164
GH14I077296 Enhancer 0.7 ENCODE dbSUPER 11.5 +30.5 30469 1.1 LCORL NFIC ZNF544 NFIB ZIC2 GSTZ1 POMT2 NGB MIR1260A ZDHHC22 ENSG00000201384 VIPAS39 AHSA1 CIPC TMEM63C
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR1260A on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR1260A Gene

Genomic Locations for MIR1260A Gene
73 bases
Plus strand

Genomic View for MIR1260A Gene

Genes around MIR1260A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR1260A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR1260A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR1260A Gene

Proteins for MIR1260A Gene

Post-translational modifications for MIR1260A Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR1260A Gene

Domains & Families for MIR1260A Gene

Gene Families for MIR1260A Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR1260A: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR1260A Gene

Function for MIR1260A Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR1260A Gene

Localization for MIR1260A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR1260A Gene

Pathways & Interactions for MIR1260A Gene

SuperPathways for MIR1260A Gene

No Data Available

Interacting Proteins for MIR1260A Gene

Gene Ontology (GO) - Biological Process for MIR1260A Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR1260A Gene

Drugs & Compounds for MIR1260A Gene

No Compound Related Data Available

Transcripts for MIR1260A Gene

mRNA/cDNA for MIR1260A Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR1260A Gene

No ASD Table

Relevant External Links for MIR1260A Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR1260A Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR1260A Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR1260A Gene:

genes like me logo Genes that share expression patterns with MIR1260A: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR1260A Gene

Orthologs for MIR1260A Gene

Evolution for MIR1260A Gene

Gene Tree for MIR1260A (if available)
Gene Tree for MIR1260A (if available)

No data available for Orthologs for MIR1260A Gene

Paralogs for MIR1260A Gene

No data available for Paralogs for MIR1260A Gene

Variants for MIR1260A Gene

Sequence variations from dbSNP and Humsavar for MIR1260A Gene

SNP ID Clin Chr 14 pos Variation AA Info Type
rs1001417178 -- 77,265,797(+) C/T upstream_transcript_variant
rs1001482008 -- 77,265,637(+) C/T upstream_transcript_variant
rs1002568109 -- 77,265,017(+) C/T upstream_transcript_variant
rs1002924588 -- 77,265,357(+) C/A upstream_transcript_variant
rs1003559508 -- 77,264,365(+) G/A upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR1260A Gene

Variant ID Type Subtype PubMed ID
nsv1361 CNV deletion 18451855

Additional Variant Information for MIR1260A Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR1260A Gene

Disorders for MIR1260A Gene

Additional Disease Information for MIR1260A

No disorders were found for MIR1260A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR1260A Gene

Publications for MIR1260A Gene

  1. Identification and characterization of microRNAs in vascular smooth muscle cells from patients with abdominal aortic aneurysms. (PMID: 23746831) Cheuk BL … Cheng SW (Journal of vascular surgery 2014) 3 58
  2. microRNAs in circulation are altered in response to influenza A virus infection in humans. (PMID: 24116168) Tambyah PA … Jeyaseelan K (PloS one 2013) 3 58
  3. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A … Griffiths-Jones S (Nucleic acids research 2011) 3 58
  4. Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells. (PMID: 18285502) Morin RD … Marra MA (Genome research 2008) 3 58
  5. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR1260A Gene

Sources for MIR1260A Gene

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