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Aliases for MICD Gene

Aliases for MICD Gene

  • MHC Class I Polypeptide-Related Sequence D (Pseudogene) 2 3 5
  • MHC Class I Polypeptide-Related Sequence D, Pseudogene 2
  • MHC Class I Polypeptide-Related Sequence D 2
  • PERB11.4 3

External Ids for MICD Gene

Previous GeneCards Identifiers for MICD Gene

  • GC06U990082
  • GC06M030043
  • GC06M030046
  • GC06M029939
  • GC06M029940
  • GC06Mj29929
  • GC06M029943
  • GC06M029957
  • GC06M030026
  • GC06M030003
  • GC06M030037
  • GC06M030054
  • GC06M030134
  • GC06M030193
  • GC06M030166
  • GC06M030274
  • GC06M030242

Summaries for MICD Gene

GeneCards Summary for MICD Gene

MICD (MHC Class I Polypeptide-Related Sequence D (Pseudogene)) is a Pseudogene.

Additional gene information for MICD Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MICD Gene

Genomics for MICD Gene

GeneHancer (GH) Regulatory Elements for MICD Gene

Promoters and enhancers for MICD Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J029976 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 669.9 -1.2 -1210 1.7 HDGF PKNOX1 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 POLR2B ZNF213 MICD HCG9 HLA-J HCG4P3 HLA-K ZFP57 HLA-H ZNRD1 HLA-A HCG4P7
GH06J030210 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 32.2 -237.1 -237144 4.1 PKNOX1 MLX ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 ZNF213 ZNF143 TRIM26 PIR43263 HLA-U DHX16 HLA-W MICD TRIM39 ZNRD1 PPP1R10 PAIP1P1
GH06J030715 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 22.4 -743.8 -743781 7.7 CLOCK MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 MDC1 TUBB DDX39B LY6G5B TRIM39 DHX16 PPP1R10 ZNRD1 PAIP1P1 NRM
GH06J030611 Promoter/Enhancer 2.6 EPDnew Ensembl ENCODE dbSUPER 20.5 -639.8 -639807 8.7 CLOCK MLX ZFP64 DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 PPP1R10 MRPS18B MDC1 DDX39B TRIM39 NRM DHX16 ZNRD1 ABCF1 TRIM26
GH06J030324 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 22.5 -350.7 -350683 3.5 HDGF PKNOX1 SMAD1 ARNT ARID4B SIN3A YBX1 FEZF1 DMAP1 ZNF2 HCG18 TRIM39 HCG17 MICD GTF2H4 ZNRD1ASP NRM ZNRD1 DHX16 RPL23AP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MICD on UCSC Golden Path with GeneCards custom track

Genomic Locations for MICD Gene

Genomic Locations for MICD Gene
chr6:29,970,372-29,975,745
(GRCh38/hg38)
Size:
5,374 bases
Orientation:
Minus strand
chr6:29,938,149-29,943,522
(GRCh37/hg19)
Size:
5,374 bases
Orientation:
Minus strand

Genomic View for MICD Gene

Genes around MICD on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MICD Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MICD Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Function for MICD Gene

Molecular function for MICD Gene

GENATLAS Biochemistry:
MHC class I,chain-related gene D

Phenotypes From GWAS Catalog for MICD Gene

Animal Model Products

Clone Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MICD Gene

Localization for MICD Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MICD Gene

Pathways & Interactions for MICD Gene

No Data Available

Interacting Proteins for MICD Gene

Gene Ontology (GO) - Biological Process for MICD Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MICD Gene

Drugs & Compounds for MICD Gene

No Compound Related Data Available

Transcripts for MICD Gene

mRNA/cDNA for MICD Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MICD Gene

No ASD Table

Relevant External Links for MICD Gene

GeneLoc Exon Structure for
MICD
ECgene alternative splicing isoforms for
MICD

Expression for MICD Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MICD Gene

mRNA differential expression in normal tissues according to GTEx for MICD Gene

This gene is overexpressed in Whole Blood (x13.0).

NURSA nuclear receptor signaling pathways regulating expression of MICD Gene:

MICD
genes like me logo Genes that share expression patterns with MICD: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MICD Gene

Orthologs for MICD Gene

Evolution for MICD Gene

ENSEMBL:
Gene Tree for MICD (if available)
TreeFam:
Gene Tree for MICD (if available)

No data available for Orthologs for MICD Gene

Paralogs for MICD Gene

No data available for Paralogs for MICD Gene

Variants for MICD Gene

Additional Variant Information for MICD Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MICD

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MICD Gene

Disorders for MICD Gene

Additional Disease Information for MICD

Genetic Association Database
(GAD)
Human Genome Epidemiology Navigator
(HuGE)

No disorders were found for MICD Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MICD Gene

Publications for MICD Gene

  1. A major histocompatibility Class I locus contributes to multiple sclerosis susceptibility independently from HLA-DRB1*15:01. (PMID: 20593013) Cree BA … IMSGC (PloS one 2010) 3 44 58
  2. Molecular dynamics of MHC genesis unraveled by sequence analysis of the 1,796,938-bp HLA class I region. (PMID: 10557312) Shiina T … Inoko H (Proceedings of the National Academy of Sciences of the United States of America 1999) 2 3 58
  3. A second lineage of mammalian major histocompatibility complex class I genes. (PMID: 8022771) Bahram S … Spies T (Proceedings of the National Academy of Sciences of the United States of America 1994) 2 3 58
  4. Genome-wide association study identifies variants in the MHC class I, IL10, and IL23R-IL12RB2 regions associated with Behçet's disease. (PMID: 20622878) Remmers EF … Gül A (Nature genetics 2010) 44 58

Products for MICD Gene

Sources for MICD Gene

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