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Aliases for MIATNB Gene

Subcategory (RNA class) for MIATNB Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for MIATNB Gene

  • MIAT Neighbor 2 3 5
  • MIAT Neighbor (Non-Protein Coding) 2 3

External Ids for MIATNB Gene

Summaries for MIATNB Gene

GeneCards Summary for MIATNB Gene

MIATNB (MIAT Neighbor) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for MIATNB Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIATNB Gene

Genomics for MIATNB Gene

GeneHancer (GH) Regulatory Elements for MIATNB Gene

Promoters and enhancers for MIATNB Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIATNB on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIATNB Gene

Genomic Locations for MIATNB Gene
chr22:26,672,747-26,780,893
(GRCh38/hg38)
Size:
108,147 bases
Orientation:
Plus strand

Genomic View for MIATNB Gene

Genes around MIATNB on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIATNB Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIATNB Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIATNB Gene

Proteins for MIATNB Gene

Post-translational modifications for MIATNB Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIATNB Gene

Domains & Families for MIATNB Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIATNB Gene

Function for MIATNB Gene

Phenotypes From GWAS Catalog for MIATNB Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIATNB Gene

Localization for MIATNB Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIATNB Gene

Pathways & Interactions for MIATNB Gene

PathCards logo

SuperPathways for MIATNB Gene

No Data Available

Interacting Proteins for MIATNB Gene

Gene Ontology (GO) - Biological Process for MIATNB Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIATNB Gene

Drugs & Compounds for MIATNB Gene

No Compound Related Data Available

Transcripts for MIATNB Gene

mRNA/cDNA for MIATNB Gene

(5) Additional mRNA sequences :
(10) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(10) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for MIATNB Gene

No ASD Table

Relevant External Links for MIATNB Gene

GeneLoc Exon Structure for
MIATNB
ECgene alternative splicing isoforms for
MIATNB

Expression for MIATNB Gene

NURSA nuclear receptor signaling pathways regulating expression of MIATNB Gene:

MIATNB
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIATNB Gene

Orthologs for MIATNB Gene

Evolution for MIATNB Gene

ENSEMBL:
Gene Tree for MIATNB (if available)
TreeFam:
Gene Tree for MIATNB (if available)

No data available for Orthologs for MIATNB Gene

Paralogs for MIATNB Gene

No data available for Paralogs for MIATNB Gene

Variants for MIATNB Gene

Sequence variations from dbSNP and Humsavar for MIATNB Gene

SNP ID Clin Chr 22 pos Variation AA Info Type
rs1000012610 -- 26,676,215(+) TTCCATTCCAT/TTCCAT intron_variant
rs1000053583 -- 26,731,834(+) T/C intron_variant
rs1000068732 -- 26,676,023(+) T/C intron_variant
rs1000083836 -- 26,749,042(+) G/A intron_variant
rs1000086858 -- 26,756,143(+) T/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for MIATNB Gene

Variant ID Type Subtype PubMed ID
dgv2451n106 CNV deletion 24896259
esv1004142 CNV deletion 20482838
esv1328032 CNV deletion 17803354
esv2407480 CNV deletion 18987734
esv2558081 CNV deletion 19546169
esv2669517 CNV deletion 23128226
esv2724094 CNV deletion 23290073
esv2724096 CNV deletion 23290073
esv3033790 CNV deletion 24192839
esv3558020 CNV deletion 23714750
esv3568338 CNV loss 25503493
esv3647483 CNV loss 21293372
esv4774 CNV loss 18987735
esv8251 CNV loss 19470904
esv996135 CNV deletion 20482838
nsv1136352 CNV deletion 24896259
nsv1136665 CNV deletion 24896259
nsv1144970 CNV deletion 24896259
nsv1146277 CNV deletion 26484159
nsv512652 CNV loss 21212237
nsv514968 CNV gain 21397061
nsv7350 OTHER inversion 18451855
nsv955463 CNV deletion 24416366

Additional Variant Information for MIATNB Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIATNB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIATNB Gene

Disorders for MIATNB Gene

Additional Disease Information for MIATNB

No disorders were found for MIATNB Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIATNB Gene

Publications for MIATNB Gene

  1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 58

Products for MIATNB Gene

Sources for MIATNB Gene

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