MGC34796 Gene (Pseudogene)

Sepiapterin Reductase (7,8-Dihydrobiopterin:NADP+ Oxidoreductase) Pseudogene

GC01P061654
GIFtS:
8

Aliases for MGC34796 Gene

Aliases for MGC34796 Gene

  • Sepiapterin Reductase (7,8-Dihydrobiopterin:NADP+ Oxidoreductase) Pseudogene 3

External Ids for MGC34796 Gene

Previous GeneCards Identifiers for MGC34796 Gene

  • GC01U901035
  • GC01P061819
  • GC01P062120

Summaries for MGC34796 Gene

GeneCards Summary for MGC34796 Gene

MGC34796 (Sepiapterin Reductase (7,8-Dihydrobiopterin:NADP+ Oxidoreductase) Pseudogene) is a Pseudogene.

Additional gene information for MGC34796 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MGC34796 Gene

Genomics for MGC34796 Gene

GeneHancer (GH) Regulatory Elements for MGC34796 Gene

Promoters and enhancers for MGC34796 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH01J061656 Enhancer 0.3 Ensembl 0.7 +3.0 2959 0.4 ZNF512 PRDM1 ENSG00000223920 MGC34796 HSALNG0004038
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MGC34796 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MGC34796 Gene

Genomic Locations for MGC34796 Gene
chr1:61,654,242-61,656,128
(GRCh38/hg38)
Size:
1,887 bases
Orientation:
Plus strand
chr1:62,119,810-62,121,190
(GRCh37/hg19)
Size:
1,381 bases
Orientation:
Plus strand

Genomic View for MGC34796 Gene

Genes around MGC34796 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MGC34796 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MGC34796 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for MGC34796 Gene

Proteins for MGC34796 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for MGC34796 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MGC34796 Gene

Domains & Families for MGC34796 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MGC34796 Gene

Function for MGC34796 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MGC34796 Gene

Localization for MGC34796 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MGC34796 Gene

Pathways & Interactions for MGC34796 Gene

PathCards logo

SuperPathways for MGC34796 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for MGC34796 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MGC34796 Gene

Drugs & Compounds for MGC34796 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for MGC34796 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for MGC34796 Gene

5 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for MGC34796 Gene

No ASD Table

Relevant External Links for MGC34796 Gene

GeneLoc Exon Structure for
MGC34796

Expression for MGC34796 Gene

Products:

  1. Primer
  2. Gene Expression Assay

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MGC34796 Gene

mRNA expression in normal human tissues for MGC34796 Gene
mRNA expression by GTEx for MGC34796 Gene

mRNA differential expression in normal tissues according to GTEx for MGC34796 Gene

This gene is overexpressed in Testis (x41.9).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for MGC34796

SOURCE GeneReport for Unigene cluster for MGC34796 Gene:

Hs.371864
genes like me logo Genes that share expression patterns with MGC34796: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MGC34796 Gene

Orthologs for MGC34796 Gene

No data available for Orthologs and Evolution for MGC34796 Gene

Paralogs for MGC34796 Gene

No data available for Paralogs for MGC34796 Gene

Variants for MGC34796 Gene

Products:

  1. SNP Genotyping and Copy Number Assay

Structural Variations from Database of Genomic Variants (DGV) for MGC34796 Gene

Variant ID Type Subtype PubMed ID
dgv302n54 CNV loss 21841781
dgv42e212 CNV loss 25503493
dgv45e199 CNV deletion 23128226
nsv1010797 CNV gain 25217958
nsv435721 CNV deletion 17901297
nsv508226 CNV deletion 20534489

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Variation tolerance and Additional Variant Information for MGC34796 Gene

Disorders for MGC34796 Gene

Additional Disease Information for MGC34796

Genetic Association Database
(GAD)

No disorders were found for MGC34796 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MGC34796 Gene

Publications for MGC34796 Gene

  1. Systematic interactome mapping of acute lymphoblastic leukemia cancer gene products reveals EXT-1 tumor suppressor as a Notch1 and FBWX7 common interactor. (PMID: 27229929) Daakour S … Twizere JC (BMC cancer 2016) 3 54
  2. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T … Vidal M (Cell 2014) 3 54
  3. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 41 54
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54

No data available for Mastermind for MGC34796 Gene

Products for MGC34796 Gene

Sources for MGC34796 Gene