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Aliases for MGC27382 Gene

Subcategory (RNA class) for MGC27382 Gene


Quality Score for this RNA gene is


Aliases for MGC27382 Gene

  • Uncharacterized MGC27382 3 5

External Ids for MGC27382 Gene

Previous GeneCards Identifiers for MGC27382 Gene

  • GC01P078855
  • GC01P077594
  • GC01P078087
  • GC01U900421
  • GC01P078407
  • GC01P078696

Summaries for MGC27382 Gene

GeneCards Summary for MGC27382 Gene

MGC27382 (Uncharacterized MGC27382) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for MGC27382 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MGC27382 Gene

Genomics for MGC27382 Gene

GeneHancer (GH) Regulatory Elements for MGC27382 Gene

Promoters and enhancers for MGC27382 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I078237 Enhancer 0.5 ENCODE 0.4 +8.2 8233 0.2 ZNF217 FOXA2 SMC3 FOXA1 TCF7L2 PIR53489 MGC27382 GC01P078185 PTGFR
GH01I078254 Enhancer 0.6 ENCODE 0.3 +25.1 25093 0.2 PKNOX1 JUN CEBPB EP300 RAD21 BRCA1 RFX5 HIC1 JUND STAT3 PIR53489 MGC27382 PTGFR
GH01I078238 Enhancer 0.3 FANTOM5 0.4 +8.5 8481 0.2 ZNF217 NEXN PIR53489 MGC27382 GC01P078185 PTGFR
GH01I078255 Enhancer 0.4 ENCODE 0.3 +26.1 26083 0.9 POLR2A EP300 PIR53489 MGC27382 PTGFR
GH01I078303 Enhancer 0.6 ENCODE 0.2 +74.4 74369 0.9 JUN CEBPB EP300 RAD21 RFX5 JUND STAT3 SMC3 FOS PTGFR ENSG00000227556 MGC27382
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MGC27382 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the MGC27382 gene promoter:

Genomic Locations for MGC27382 Gene

Genomic Locations for MGC27382 Gene
139,866 bases
Plus strand

Genomic View for MGC27382 Gene

Genes around MGC27382 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MGC27382 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MGC27382 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MGC27382 Gene

Proteins for MGC27382 Gene

Post-translational modifications for MGC27382 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MGC27382 Gene

Domains & Families for MGC27382 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MGC27382 Gene

Function for MGC27382 Gene

Phenotypes From GWAS Catalog for MGC27382 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MGC27382 Gene

Localization for MGC27382 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MGC27382 Gene

Pathways & Interactions for MGC27382 Gene

SuperPathways for MGC27382 Gene

No Data Available

Interacting Proteins for MGC27382 Gene

Gene Ontology (GO) - Biological Process for MGC27382 Gene


No data available for Pathways by source and SIGNOR curated interactions for MGC27382 Gene

Drugs & Compounds for MGC27382 Gene

No Compound Related Data Available

Transcripts for MGC27382 Gene

mRNA/cDNA for MGC27382 Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(4) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MGC27382 Gene

Uncharacterized MGC27382:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MGC27382 Gene

No ASD Table

Relevant External Links for MGC27382 Gene

GeneLoc Exon Structure for

Expression for MGC27382 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MGC27382 Gene

mRNA differential expression in normal tissues according to GTEx for MGC27382 Gene

This gene is overexpressed in Lung (x11.9) and Liver (x11.0).

SOURCE GeneReport for Unigene cluster for MGC27382 Gene:

genes like me logo Genes that share expression patterns with MGC27382: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MGC27382 Gene

Orthologs for MGC27382 Gene

Evolution for MGC27382 Gene

Gene Tree for MGC27382 (if available)
Gene Tree for MGC27382 (if available)

No data available for Orthologs for MGC27382 Gene

Paralogs for MGC27382 Gene

No data available for Paralogs for MGC27382 Gene

Variants for MGC27382 Gene

Sequence variations from dbSNP and Humsavar for MGC27382 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000008889 -- 78,247,852(+) C/T intron_variant
rs1000010006 -- 78,344,315(+) A/C intron_variant
rs1000031515 -- 78,350,300(+) G/A intron_variant
rs1000042999 -- 78,248,183(+) T/C intron_variant
rs1000053816 -- 78,351,973(+) T/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for MGC27382 Gene

Variant ID Type Subtype PubMed ID
esv23037 CNV loss 19812545
esv2661951 CNV deletion 23128226
esv2675789 CNV deletion 23128226
esv2762158 CNV loss 21179565
esv2763564 CNV loss 21179565
esv2763565 CNV loss 21179565
esv3577975 CNV loss 25503493
esv3581915 CNV gain 25503493
esv3586541 CNV loss 21293372
nsv1011898 CNV loss 25217958
nsv1113138 CNV deletion 24896259
nsv1555 CNV insertion 18451855
nsv946008 CNV duplication 23825009
nsv946009 CNV duplication 23825009

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for MGC27382 Gene

Disorders for MGC27382 Gene

Additional Disease Information for MGC27382

No disorders were found for MGC27382 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MGC27382 Gene

Publications for MGC27382 Gene

  1. Gene-alcohol interactions identify several novel blood pressure loci including a promising locus near SLC16A9. (PMID: 24376456) Simino J … Rao DC (Frontiers in genetics 2013) 3 58
  2. A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study. (PMID: 17903292) Hwang SJ … Fox CS (BMC medical genetics 2007) 44 58
  3. Framingham Heart Study 100K Project: genome-wide associations for blood pressure and arterial stiffness. (PMID: 17903302) Levy D … Mitchell GF (BMC medical genetics 2007) 44 58
  4. Genome-wide association with select biomarker traits in the Framingham Heart Study. (PMID: 17903293) Benjamin EJ … Vasan RS (BMC medical genetics 2007) 44 58
  5. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for MGC27382 Gene

Sources for MGC27382 Gene

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