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MGC16275 (Uncharacterized Protein MGC16275) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with MGC16275 include Retinitis Pigmentosa 6 and Retinitis Pigmentosa 3.
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH17J074209 | Promoter/Enhancer | 2.3 | EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER | 600.7 | +0.4 | 407 | 6.5 | GATAD2A CTCF TEAD4 ZNF629 LEF1 ZNF692 POLR2A ZNF174 BACH1 FOXA1 | ENSG00000246731 MGC16275 TTYH2 NT5C NUP85 C17orf80 NAT9 FAM104A NONHSAG022689.2 RPL38 |
RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
---|---|---|---|---|
URS00002C96DA_9606 | lncRNA | 2501 | 5 |
RefSeq: NR_026914, Ensembl: ENST00000499670 (view in UCSC) , LncBook: HSALNT0245098, LNCipedia: lnc-BTBD17-3:2, NONCODE: NONHSAT055775.2, |
URS00019D5FE3_9606 | lncRNA | 3321 | 1 |
ENA: MN297504.1:1..3337:ncRNA, |
URS00009AFE2A_9606 | lncRNA | 2507 | 1 |
NONCODE: NONHSAT176563.1, |
URS00008B4410_9606 | lncRNA | 2485 | 1 |
LNCipedia: lnc-BTBD17-3:4, |
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
dgv12e196 | CNV | duplication | 17116639 |
dgv3282n100 | CNV | gain | 25217958 |
dgv372n27 | CNV | gain | 19166990 |
dgv5768n54 | CNV | gain | 21841781 |
dgv587e214 | CNV | gain | 21293372 |
esv2751770 | CNV | gain | 17911159 |
esv2761978 | CNV | gain | 21179565 |
esv3573820 | CNV | gain | 25503493 |
esv3641230 | CNV | gain | 21293372 |
nsv509673 | CNV | insertion | 20534489 |
nsv517569 | CNV | gain+loss | 19592680 |
nsv833538 | CNV | gain | 17160897 |
Disorder | Aliases | PubMed IDs |
---|---|---|
retinitis pigmentosa 6 |
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retinitis pigmentosa 3 |
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