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Aliases for MGC12916 Gene

Subcategory (RNA class) for MGC12916 Gene


Quality Score for this RNA gene is


Aliases for MGC12916 Gene

  • Uncharacterized Protein MGC12916 3
  • AC005224.4 5

External Ids for MGC12916 Gene

ORGUL Members for MGC12916 Gene

Previous GeneCards Identifiers for MGC12916 Gene

  • GC17U990260
  • GC17P014207

Summaries for MGC12916 Gene

GeneCards Summary for MGC12916 Gene

MGC12916 (Uncharacterized Protein MGC12916) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for MGC12916 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MGC12916 Gene

Genomics for MGC12916 Gene

GeneHancer (GH) Regulatory Elements for MGC12916 Gene

Promoters and enhancers for MGC12916 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I014299 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 558.6 +1.3 1299 12 HDGF FOXA2 PKNOX1 CLOCK ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 HS3ST3B1 MGC12916 CDRT15P1 PIR55684 ENSG00000266378
GH17I014297 Promoter/Enhancer 1.6 Ensembl ENCODE dbSUPER 5.7 -6.1 -6089 1.2 ARID4B SIN3A DMAP1 ZNF48 YY1 GLIS2 KLF13 ZNF202 SP3 SP5 ENSG00000262786 MGC12916 HS3ST3B1
GH17I014351 Enhancer 1 FANTOM5 Ensembl ENCODE 6.7 +49.4 49395 3.4 RFX1 IKZF1 RUNX3 NR2F2 HS3ST3B1 MGC12916 GC17P014349 GC17M014360
GH17I013419 Enhancer 1.4 Ensembl ENCODE dbSUPER 4.6 -882.8 -882791 2.2 FOXA2 MLX ARID4B DMAP1 YY1 SLC30A9 FOS KLF13 ZHX2 REST COX10-AS1 MGC12916 GC17P013414 GC17P013426
GH17I014316 Enhancer 0.8 ENCODE 0.4 +12.8 12813 0.5 FOXA2 MLX ARID4B FEZF1 DNMT3B RAD21 RARA ZNF335 CREM THAP11 MGC12916 ENSG00000266378 HS3ST3B1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MGC12916 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the MGC12916 gene promoter:

Genomic Locations for MGC12916 Gene

Genomic Locations for MGC12916 Gene
2,006 bases
Plus strand

Genomic View for MGC12916 Gene

Genes around MGC12916 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MGC12916 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MGC12916 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MGC12916 Gene

Proteins for MGC12916 Gene

Post-translational modifications for MGC12916 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MGC12916 Gene

Domains & Families for MGC12916 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MGC12916 Gene

Function for MGC12916 Gene

Phenotypes From GWAS Catalog for MGC12916 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MGC12916 Gene

Localization for MGC12916 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MGC12916 Gene

Pathways & Interactions for MGC12916 Gene

SuperPathways for MGC12916 Gene

No Data Available

Interacting Proteins for MGC12916 Gene

Gene Ontology (GO) - Biological Process for MGC12916 Gene


No data available for Pathways by source and SIGNOR curated interactions for MGC12916 Gene

Drugs & Compounds for MGC12916 Gene

No Compound Related Data Available

Transcripts for MGC12916 Gene

mRNA/cDNA for MGC12916 Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MGC12916 Gene

Uncharacterized protein MGC12916:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MGC12916 Gene

No ASD Table

Relevant External Links for MGC12916 Gene

GeneLoc Exon Structure for

Expression for MGC12916 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MGC12916 Gene

mRNA differential expression in normal tissues according to GTEx for MGC12916 Gene

This gene is overexpressed in Whole Blood (x10.9).

SOURCE GeneReport for Unigene cluster for MGC12916 Gene:

genes like me logo Genes that share expression patterns with MGC12916: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MGC12916 Gene

Orthologs for MGC12916 Gene

Evolution for MGC12916 Gene

Gene Tree for MGC12916 (if available)
Gene Tree for MGC12916 (if available)

No data available for Orthologs for MGC12916 Gene

Paralogs for MGC12916 Gene

No data available for Paralogs for MGC12916 Gene

Variants for MGC12916 Gene

Sequence variations from dbSNP and Humsavar for MGC12916 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000059430 -- 14,303,348(+) A/G upstream_transcript_variant
rs1000087675 -- 14,303,319(+) A/G upstream_transcript_variant
rs1000543064 -- 14,303,138(+) A/G upstream_transcript_variant
rs1001201933 -- 14,302,663(+) T/C upstream_transcript_variant
rs1001265020 -- 14,302,837(+) C/T upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MGC12916 Gene

Variant ID Type Subtype PubMed ID
esv3640020 CNV loss 21293372
esv3640021 CNV gain 21293372
nsv574377 CNV gain 21841781

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for MGC12916 Gene

Disorders for MGC12916 Gene

Additional Disease Information for MGC12916

No disorders were found for MGC12916 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MGC12916 Gene

Publications for MGC12916 Gene

  1. A genome-wide association study identifies protein quantitative trait loci (pQTLs). (PMID: 18464913) Melzer D … Ferrucci L (PLoS genetics 2008) 44 58
  2. A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study. (PMID: 17903292) Hwang SJ … Fox CS (BMC medical genetics 2007) 44 58
  3. Genome-wide association to body mass index and waist circumference: the Framingham Heart Study 100K project. (PMID: 17903300) Fox CS … Atwood LD (BMC medical genetics 2007) 44 58
  4. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan RS … Benjamin EJ (BMC medical genetics 2007) 44 58
  5. Framingham Heart Study genome-wide association: results for pulmonary function measures. (PMID: 17903307) Wilk JB … O'Connor GT (BMC medical genetics 2007) 44 58

Products for MGC12916 Gene

Sources for MGC12916 Gene

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