Aliases for MG828711 Gene

Subcategory (RNA class) for MG828711 Gene

lncRNA

Number of RNA Genes sources:

1 / 17

Aliases for MG828711 Gene

No Aliases found

No data available for External Ids for MG828711 Gene

Summaries for MG828711 Gene

GeneCards Summary for MG828711 Gene

MG828711 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for MG828711 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MG828711 Gene

Genomics for MG828711 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for MG828711 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J140536 Enhancer 1.3 FANTOM5 Ensembl ENCODE CraniofacialAtlas 600.7 -1.0 -1032 4.4 FOXA1 POLR2A IKZF2 CEBPA ATF7 SP1 RELB JUND CTCF CEBPB LOC105378027 MG828711 RF00017-5819
GH06J140543 Enhancer 0.8 Ensembl 0.7 +3.9 3868 0.2 BACH1 FOXA1 TCF12 IKZF2 TRIM22 PKNOX1 ARID3A DPF2 RELB RUNX3 LOC105378027 MG828711 FJ601684-411
GH06J140540 Enhancer 0.6 Ensembl 0.7 +2.3 2268 1 IKZF2 RELB BCL11A JUNB SMARCA5 IRF4 TBX21 MTA2 SPI1 IKZF1 LOC105378027 MG828711 FJ601684-411
GH06J140546 Enhancer 0.5 Ensembl ENCODE 0.4 +7.6 7568 0.4 ARID3A MTA2 MG828711 LOC105378027 FJ601684-411
GH06J140561 Enhancer 0.2 Ensembl 0.4 +22.8 22768 0.4 FJ601684-411 LOC105378027 MG828711
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MG828711 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for MG828711 Gene

Genomic Locations for MG828711 Gene
chr6:140,539,233-140,565,798
(GRCh38/hg38)
Size:
26,566 bases
Orientation:
Plus strand

Genomic View for MG828711 Gene

Genes around MG828711 on UCSC Golden Path with GeneCards custom track
MG828711 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

MG828711 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MG828711 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for MG828711 Gene

Proteins for MG828711 Gene

Post-translational modifications for MG828711 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MG828711 Gene

Domains & Families for MG828711 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MG828711 Gene

Function for MG828711 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MG828711 Gene

Localization for MG828711 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MG828711 Gene

Pathways & Interactions for MG828711 Gene

PathCards logo

SuperPathways for MG828711 Gene

No Data Available

Gene Ontology (GO) - Biological Process for MG828711 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MG828711 Gene

Drugs & Compounds for MG828711 Gene

No Compound Related Data Available

Transcripts for MG828711 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for MG828711 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000E49072_9606 lncRNA 305 1

ENA: MG828711.1:1..305:ncRNA,

MG828711 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for MG828711 Gene

No ASD Table

Relevant External Links for MG828711 Gene

GeneLoc Exon Structure for
MG828711

No data available for mRNA/cDNA for MG828711 Gene

Expression for MG828711 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MG828711 Gene

Orthologs for MG828711 Gene

No data available for Orthologs and Evolution for MG828711 Gene

Paralogs for MG828711 Gene

No data available for Paralogs for MG828711 Gene

Variants for MG828711 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for MG828711 Gene

Disorders for MG828711 Gene

No disorders were found for MG828711 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for MG828711 Gene

Publications for MG828711 Gene

No publications were found for MG828711 Gene.

No data available for Mastermind for MG828711 Gene

Products for MG828711 Gene

Sources for MG828711 Gene