Aliases for MG828559 Gene

Data sources for MG828559 Gene:

RNA type for MG828559 Gene

lncRNA

Aliases for MG828559 Gene

No Aliases found

No data available for External Ids for MG828559 Gene

Summaries for MG828559 Gene

GeneCards Summary for MG828559 Gene

MG828559 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for MG828559 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MG828559 Gene

Genomics for MG828559 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for MG828559 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J054250 Enhancer 1.1 ENCODE CraniofacialAtlas 250.7 -0.6 -638 5.5 CEBPA ATF3 YY1 BCL11A FOXA1 TRIM22 FEZF1 KMT2B FOXA2 KDM6A MG828559 POLI C18orf54 MBD2 SNORA37 STARD6 lnc-POLI-1 HSALNG0121639
GH18J054246 Enhancer 1 ENCODE CraniofacialAtlas dbSUPER 0.7 +4.8 4823 2.6 POLR2A BCL11A FOXA2 YY1 EBF1 SOX5 TAF1 IKZF1 ATF2 ZNF652 POLI MBD2 SNORA37 C18orf54 STARD6 ENSG00000264296 MG828559 HSALNG0121638 HSALNG0121639
GH18J054257 Enhancer 0.6 ENCODE dbSUPER 0.4 -6.0 -5989 1.3 CEBPA CEBPB NR2F6 EP300 POLI MBD2 SNORA37 C18orf54 STARD6 lnc-POLI-1 MG828559 HSALNG0121639 ENSG00000277324
GH18J054238 Enhancer 0.4 ENCODE 0.4 +12.2 12209 2.8 SPI1 MEIS2 NR2F2 POLI STARD6 C18orf54 ENSG00000264296 ENSG00000267311 HSALNG0121638 MG828559 MBD2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MG828559 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for MG828559 Gene

Latest Assembly
chr18:54,247,128-54,252,182
(GRCh38/hg38)
Size:
5,055 bases
Orientation:
Minus strand

Genomic View for MG828559 Gene

Genes around MG828559 on UCSC Golden Path with GeneCards custom track
MG828559 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

MG828559 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MG828559 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for MG828559 Gene

Proteins for MG828559 Gene

Post-translational modifications for MG828559 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MG828559 Gene

Domains & Families for MG828559 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MG828559 Gene

Function for MG828559 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MG828559 Gene

Localization for MG828559 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MG828559 Gene

Pathways & Interactions for MG828559 Gene

PathCards logo

SuperPathways for MG828559 Gene

No Data Available

Gene Ontology (GO) - Biological Process for MG828559 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MG828559 Gene

Drugs & Compounds for MG828559 Gene

No Compound Related Data Available

Transcripts for MG828559 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for MG828559 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0000E0D946_9606 lncRNA 841 1

ENA: MG828559.1:1..841:ncRNA,

MG828559 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for MG828559 Gene

No ASD Table

Relevant External Links for MG828559 Gene

GeneLoc Exon Structure for
MG828559

No data available for mRNA/cDNA for MG828559 Gene

Expression for MG828559 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MG828559 Gene

Orthologs for MG828559 Gene

No data available for Orthologs and Evolution for MG828559 Gene

Paralogs for MG828559 Gene

No data available for Paralogs for MG828559 Gene

Variants for MG828559 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for MG828559 Gene

Disorders for MG828559 Gene

No disorders were found for MG828559 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for MG828559 Gene

Publications for MG828559 Gene

No publications were found for MG828559 Gene.

No data available for Mastermind for MG828559 Gene

Products for MG828559 Gene

Sources for MG828559 Gene