Aliases for METTL15P1 Gene

Aliases for METTL15P1 Gene

  • Methyltransferase Like 15 Pseudogene 1 2 3 5
  • Methyltransferase 5 Domain Containing 2 2 3
  • METT5D2 3 4
  • Methyltransferase 5 Domain-Containing Protein 2 4
  • Methyltransferase-Like Protein 15 Pseudogene 1 4
  • Putative Methyltransferase-Like Protein 15P1 4
  • EC 2.1.1.- 4

External Ids for METTL15P1 Gene

Previous HGNC Symbols for METTL15P1 Gene

  • METT5D2

Previous GeneCards Identifiers for METTL15P1 Gene

  • GC03M156429

Summaries for METTL15P1 Gene

GeneCards Summary for METTL15P1 Gene

METTL15P1 (Methyltransferase Like 15 Pseudogene 1) is a Pseudogene. Gene Ontology (GO) annotations related to this gene include methyltransferase activity.

UniProtKB/Swiss-Prot Summary for METTL15P1 Gene

Additional gene information for METTL15P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for METTL15P1 Gene

Genomics for METTL15P1 Gene

GeneHancer (GH) Regulatory Elements for METTL15P1 Gene

Promoters and enhancers for METTL15P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J156714 Enhancer 0.2 FANTOM5 500.7 -0.1 -100 0.3 METTL15P1 TIPARP LINC00886 LEKR1 TIPARP-AS1 CCNL1 lnc-TIPARP-1
GH03J157153 Promoter/Enhancer 2.8 UCNEbase EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 10.1 -443.2 -443195 8.4 RXRA EP300 HNRNPK ZBTB40 ZNF217 CTCF SIN3A NRF1 TCF12 MYC CCNL1 lnc-VEPH1-2 KRT18P34 PA2G4P4 METTL15P1 TIPARP ENSG00000243176 LINC00880 ENSG00000201778 lnc-LEKR1-4
GH03J157085 Promoter/Enhancer 2.3 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 10.1 -374.5 -374475 7.8 ZNF217 SIN3A NRF1 USF1 POLR2G SP1 NCOR1 PHF8 ZFX ZBTB5 LINC00881 CCNL1 PA2G4P4 TIPARP-AS1 TIPARP ENSG00000241770 KRT18P34 SSR3 KCNAB1-AS1 METTL15P1
GH03J156718 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.7 -3.9 -3882 1.4 CEBPB GATA3 EP300 STAT3 GATA2 TCF7L2 FOXA1 TIPARP-AS1 LINC00886 METTL15P1 lnc-TIPARP-1
GH03J156711 Enhancer 0.5 Ensembl 0.7 +2.9 2920 0.6 ELK1 SRF HIC1 ATF7 ATF3 ATF2 TIPARP-AS1 LINC00886 LEKR1 HSALNG0030063 METTL15P1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around METTL15P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for METTL15P1 Gene

Genomic Locations for METTL15P1 Gene
chr3:156,711,403-156,715,029
(GRCh38/hg38)
Size:
3,627 bases
Orientation:
Minus strand
chr3:156,429,192-156,432,818
(GRCh37/hg19)
Size:
3,627 bases
Orientation:
Minus strand

Genomic View for METTL15P1 Gene

Genes around METTL15P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
METTL15P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for METTL15P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for METTL15P1 Gene

Proteins for METTL15P1 Gene

  • Protein details for METTL15P1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P0C7V9-ME15P_HUMAN
    Recommended name:
    Putative methyltransferase-like protein 15P1
    Protein Accession:
    P0C7V9

    Protein attributes for METTL15P1 Gene

    Size:
    234 amino acids
    Molecular mass:
    26716 Da
    Quaternary structure:
    No Data Available

neXtProt entry for METTL15P1 Gene

Post-translational modifications for METTL15P1 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for METTL15P1 Gene

Domains & Families for METTL15P1 Gene

Protein Domains for METTL15P1 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for METTL15P1 Gene

GenScript: Design optimal peptide antigens:
  • Methyltransferase-like protein 15 pseudogene 1 (ME15P_HUMAN)

Graphical View of Domain Structure for InterPro Entry

P0C7V9

UniProtKB/Swiss-Prot:

ME15P_HUMAN :
  • Belongs to the methyltransferase superfamily. RsmH family.
Family:
  • Belongs to the methyltransferase superfamily. RsmH family.
genes like me logo Genes that share domains with METTL15P1: view

No data available for Gene Families for METTL15P1 Gene

Function for METTL15P1 Gene

Molecular function for METTL15P1 Gene

UniProtKB/Swiss-Prot Function:
Probable S-adenosyl-L-methionine-dependent methyltransferase.

Enzyme Numbers (IUBMB) for METTL15P1 Gene

Phenotypes From GWAS Catalog for METTL15P1 Gene

Gene Ontology (GO) - Molecular Function for METTL15P1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0071424 rRNA (cytosine-N4-)-methyltransferase activity IBA 21873635
genes like me logo Genes that share ontologies with METTL15P1: view

Animal Model Products

CRISPR Products

No data available for Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for METTL15P1 Gene

Localization for METTL15P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for METTL15P1 Gene

Pathways & Interactions for METTL15P1 Gene

PathCards logo

SuperPathways for METTL15P1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for METTL15P1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0070475 rRNA base methylation IBA 21873635
genes like me logo Genes that share ontologies with METTL15P1: view

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for METTL15P1 Gene

Drugs & Compounds for METTL15P1 Gene

(1) Additional Compounds for METTL15P1 Gene - From: HMDB

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
s-adenosylmethionine
  • (3S)-5'-[(3-amino-3-Carboxypropyl)methylsulfonio]-5'-deoxyadenosine, inner salt
  • [1-(Adenin-9-yl)-1,5-dideoxy-beta-D-ribofuranos-5-yl][(3S)-3-amino-3-carboxypropyl](methyl)sulfonium
  • Acylcarnitine
  • AdoMet
  • S-(5'-Deoxyadenosin-5'-yl)-L-methionine
485-80-3
genes like me logo Genes that share compounds with METTL15P1: view

Transcripts for METTL15P1 Gene

mRNA/cDNA for METTL15P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for METTL15P1 Gene

No ASD Table

Relevant External Links for METTL15P1 Gene

GeneLoc Exon Structure for
METTL15P1

Expression for METTL15P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for METTL15P1 Gene

genes like me logo Genes that share expression patterns with METTL15P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for METTL15P1 Gene

Orthologs for METTL15P1 Gene

Evolution for METTL15P1 Gene

ENSEMBL:
Gene Tree for METTL15P1 (if available)
TreeFam:
Gene Tree for METTL15P1 (if available)

No data available for Orthologs for METTL15P1 Gene

Paralogs for METTL15P1 Gene

(1) SIMAP similar genes for METTL15P1 Gene using alignment to 1 proteins:

  • ME15P_HUMAN
genes like me logo Genes that share paralogs with METTL15P1: view

No data available for Paralogs for METTL15P1 Gene

Variants for METTL15P1 Gene

Additional Variant Information for METTL15P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
METTL15P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for METTL15P1 Gene

Disorders for METTL15P1 Gene

No disorders were found for METTL15P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for METTL15P1 Gene

Publications for METTL15P1 Gene

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. (PMID: 21873635) Gaudet P … Thomas PD (Briefings in bioinformatics 2011) 3 54
  2. The DNA sequence, annotation and analysis of human chromosome 3. (PMID: 16641997) Muzny DM … Gibbs RA (Nature 2006) 4 54
  3. Shotgun sequencing of the human transcriptome with ORF expressed sequence tags. (PMID: 10737800) Dias Neto E … Simpson AJ (Proceedings of the National Academy of Sciences of the United States of America 2000) 4 54

Products for METTL15P1 Gene

Sources for METTL15P1 Gene