Aliases for MED28P1 Gene

Aliases for MED28P1 Gene

  • Mediator Complex Subunit 28 Pseudogene 1 2 3 5
  • MED28P1 5

External Ids for MED28P1 Gene

Previous GeneCards Identifiers for MED28P1 Gene

  • GC10P070752

Summaries for MED28P1 Gene

GeneCards Summary for MED28P1 Gene

MED28P1 (Mediator Complex Subunit 28 Pseudogene 1) is a Pseudogene.

Additional gene information for MED28P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MED28P1 Gene

Genomics for MED28P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for MED28P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J068988 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 250.7 -1.8 -1827 2.6 BCLAF1 SP1 ZNF207 MYC ZNF600 IKZF1 ZNF580 POLR2A CEBPA NFIC KIFBP HSALNG0078554 MED28P1 CCAR1 HNRNPH3 HERC4 DDX50 RPL26P27 SRGN
GH10J068991 Enhancer 0.5 ENCODE 250.7 +1.9 1899 1.8 INSM2 PKNOX1 GFI1B ZBTB17 FOS CEBPB ZBTB20 WT1 HSALNG0078554 MED28P1 SRGN DDX21 VPS26A HKDC1 KIFBP RF00017-611
GH10J069064 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 10.5 +74.6 74632 2 BCLAF1 SP1 BCL11A EBF1 SMARCA5 SPI1 POLR2A BATF ELF1 STAT5A lnc-TACR2-10 KIFBP SRGN MED28P1 LOC101928994 HK1 VPS26A lnc-KIF1BP-2 lnc-TACR2-6
GH10J069100 Promoter/Enhancer 1.1 Ensembl ENCODE dbSUPER 10.6 +110.9 110858 2.9 CEBPA CEBPB MAX POLR2A ZNF384 ZMYM3 KDM1A ATF3 BCOR ZNF121 SRGN KIFBP MED28P1 VPS26A SUPV3L1 ENSG00000274008 lnc-TACR2-9 NONHSAG006100.2
GH10J069027 Enhancer 0.7 Ensembl ENCODE 11.9 +36.8 36773 1 SMARCA5 IKZF1 NR2F1 JUNB SPI1 IKZF2 NBN HMBOX1 MLLT1 FJ601666-008 SRGN KIFBP MED28P1 VPS26A STOX1 RF00017-612
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MED28P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for MED28P1 Gene

Latest Assembly
chr10:68,991,128-68,991,868
(GRCh38/hg38)
Size:
741 bases
Orientation:
Plus strand

Previous Assembly
chr10:70,750,884-70,751,624
(GRCh37/hg19 by Entrez Gene)
Size:
741 bases
Orientation:
Plus strand

chr10:70,750,893-70,751,463
(GRCh37/hg19 by Ensembl)
Size:
571 bases
Orientation:
Plus strand

Genomic View for MED28P1 Gene

Genes around MED28P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MED28P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MED28P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MED28P1 Gene

Proteins for MED28P1 Gene

Post-translational modifications for MED28P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MED28P1 Gene

Domains & Families for MED28P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MED28P1 Gene

Function for MED28P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MED28P1 Gene

Localization for MED28P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MED28P1 Gene

Pathways & Interactions for MED28P1 Gene

PathCards logo

SuperPathways for MED28P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for MED28P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MED28P1 Gene

Drugs & Compounds for MED28P1 Gene

No Compound Related Data Available

Transcripts for MED28P1 Gene

mRNA/cDNA for MED28P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MED28P1 Gene

No ASD Table

Relevant External Links for MED28P1 Gene

GeneLoc Exon Structure for
MED28P1

Expression for MED28P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MED28P1 Gene

genes like me logo Genes that share expression patterns with MED28P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MED28P1 Gene

Orthologs for MED28P1 Gene

Evolution for MED28P1 Gene

ENSEMBL:
Gene Tree for MED28P1 (if available)
TreeFam:
Gene Tree for MED28P1 (if available)
Alliance of Genome Resources:
Additional Orthologs for MED28P1

No data available for Orthologs for MED28P1 Gene

Paralogs for MED28P1 Gene

No data available for Paralogs for MED28P1 Gene

Variants for MED28P1 Gene

Additional Variant Information for MED28P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MED28P1
Leiden Open Variation Database (LOVD)
MED28P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MED28P1 Gene

Disorders for MED28P1 Gene

No disorders were found for MED28P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for MED28P1 Gene

Publications for MED28P1 Gene

No publications were found for MED28P1 Gene.

No data available for Mastermind for MED28P1 Gene

Products for MED28P1 Gene

Sources for MED28P1 Gene