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Aliases for MBNL1-AS1 Gene
Subcategory (RNA class) for MBNL1-AS1 Gene
lncRNA
Aliases for MBNL1-AS1 Gene
External Ids for MBNL1-AS1 Gene
- HGNC: 44584
- NCBI Entrez Gene: 401093
- Ensembl: ENSG00000229619
Previous GeneCards Identifiers for MBNL1-AS1 Gene
- GC03M151982
- GC03M152262
Summaries for MBNL1-AS1 Gene
GeneCards Summary for MBNL1-AS1 Gene
MBNL1-AS1 (MBNL1 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.
Additional gene information for MBNL1-AS1 Gene
- HGNC (44584)
- NCBI Entrez Gene (401093)
- Ensembl (ENSG00000229619)
- Open Targets Platform(ENSG00000229619)
- Search for MBNL1-AS1 at DataMed
- Search for MBNL1-AS1 at HumanCyc
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MBNL1-AS1 Gene
Genomics for MBNL1-AS1 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for MBNL1-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around MBNL1-AS1 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for MBNL1-AS1 Gene
Latest Assembly
- chr3:152,215,092-152,269,626
- (GRCh38/hg38)
- Size:
- 54,535 bases
- Orientation:
- Minus strand
Previous Assembly
- chr3:151,980,405-151,987,415
- (GRCh37/hg19 by Entrez Gene)
- Size:
- 7,011 bases
- Orientation:
- Minus strand
- chr3:151,980,405-151,987,344
- (GRCh37/hg19 by Ensembl)
- Size:
- 6,940 bases
- Orientation:
- Minus strand
Genomic View for MBNL1-AS1 Gene
Genes around MBNL1-AS1 on UCSC Golden Path with GeneCards custom track
MBNL1-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path
- Cytogenetic band:
-
- 3q25.1 by HGNC
- 3q25.1 by Entrez Gene
- 3q25.1 by Ensembl
MBNL1-AS1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for MBNL1-AS1 Gene
Proteins for MBNL1-AS1 Gene
Post-translational modifications for MBNL1-AS1 Gene
No Post-translational modifications
No data available for DME Specific Peptides for MBNL1-AS1 Gene
Domains & Families for MBNL1-AS1 Gene
Gene Families for MBNL1-AS1 Gene
- HGNC:
No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MBNL1-AS1 Gene
Function for MBNL1-AS1 Gene
Phenotypes From GWAS Catalog for MBNL1-AS1 Gene
CRISPR products for research
Inhibitory RNAs for research
- Origene shrna and sirna products in human, mouse, rat for MBNL1-AS1
- Browse OriGene Inhibitory RNA Products For MBNL1-AS1
Clone products for research
Cell Lines for research
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MBNL1-AS1 Gene
Localization for MBNL1-AS1 Gene
| Compartment | Confidence |
|---|---|
| extracellular | 1 |
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MBNL1-AS1 Gene
Transcripts for MBNL1-AS1 Gene
Non-coding RNA (ncRNA) Transcripts from RNAcentral for MBNL1-AS1 Gene
| RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
|---|---|---|---|---|
| URS00000DB494_9606 | lncRNA | 6587 | 2 |
Ensembl: ENST00000608395 (view in UCSC) , LNCipedia: MBNL1-AS1:3, |
| URS00002B2516_9606 | lncRNA | 997 | 2 |
Ensembl: ENST00000445466 (view in UCSC) , LNCipedia: MBNL1-AS1:4, MBNL1-AS1:7, |
| URS0000759FEE_9606 | lncRNA | 6656 | 1 |
RefSeq: NR_027038, |
| URS000075BBFA_9606 | lncRNA | 6645 | 1 |
RefSeq: NR_027037, |
| URS0000EF4D71_9606 | lncRNA | 3244 | 1 |
Ensembl: ENST00000665663 (view in UCSC) , |
MBNL1-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path
Additional transcripts not in RNAcentral for MBNL1-AS1 Gene
- 6 NCBI additional mRNA sequence :
CRISPR products for research
Inhibitory RNAs for research
- Origene shrna and sirna products in human, mouse, rat for MBNL1-AS1
- Browse OriGene Inhibitory RNA Products For MBNL1-AS1
Clone products for research
Relevant External Links for MBNL1-AS1 Gene
- GeneLoc Exon Structure for
- MBNL1-AS1
Expression for MBNL1-AS1 Gene
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for MBNL1-AS1
SOURCE GeneReport for Unigene cluster for MBNL1-AS1 Gene:
Hs.725347
No Expression Related Data Available
Gene Expression Assays for research
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MBNL1-AS1 Gene
Orthologs for MBNL1-AS1 Gene
No data available for Orthologs for MBNL1-AS1 Gene
Paralogs for MBNL1-AS1 Gene
No data available for Paralogs for MBNL1-AS1 Gene
Variants for MBNL1-AS1 Gene
Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for MBNL1-AS1 Gene
| SNP ID | Clinical significance and condition | Chr 03 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs17433672 | Benign: not specified | 152,268,473(-) |
C/T NM_001376819.1(MBNL1):c.-790+24033C>T |
NON_CODING_TRANSCRIPT_VARIANT,INTRON |
All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).
Additional Variant Information for MBNL1-AS1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- MBNL1-AS1
SNP Genotyping and Copy Number Assays for research
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MBNL1-AS1 Gene
Disorders for MBNL1-AS1 Gene
Additional Disease Information for MBNL1-AS1
- Atlas
- ATLAS of Genetics and Cytogenetics in Oncology and Haematology
- Open Targets Platform
- Open Targets Platform
No disorders were found for MBNL1-AS1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MBNL1-AS1 Gene
Publications for MBNL1-AS1 Gene
- Long non-coding RNA MBNL1-AS1 regulates proliferation, migration, and invasion of cancer stem cells in colon cancer by interacting with MYL9 via sponging microRNA-412-3p. (PMID: 31255531) Zhu K … Yu W (Clinics and research in hepatology and gastroenterology 2020) 2 3
- LncRNA MBNL1-AS1 represses cell proliferation and enhances cell apoptosis via targeting miR-135a-5p/PHLPP2/FOXO1 axis in bladder cancer. (PMID: 31769229) Wei X … Song D (Cancer medicine 2020) 3
- microRNA-301b-3p downregulation underlies a novel inhibitory role of long non-coding RNA MBNL1-AS1 in non-small cell lung cancer. (PMID: 31113460) Li P … Ma H (Stem cell research & therapy 2019) 3
- Differentially Expressed lncRNAs in Gastric Cancer Patients: A Potential Biomarker for Gastric Cancer Prognosis. (PMID: 28900495) Tian X … Fang JY (Journal of Cancer 2017) 3
- Transcriptome analysis of human gastric cancer. (PMID: 16341674) Oh JH … Kim NS (Mammalian genome : official journal of the International Mammalian Genome Society 2005) 3
Products for MBNL1-AS1 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for MBNL1-AS1
- Origene Custom Protein Services for MBNL1-AS1
- Origene shrna and sirna products in human, mouse, rat for MBNL1-AS1
- Browse OriGene Inhibitory RNA Products For MBNL1-AS1
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for MBNL1-AS1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For MBNL1-AS1
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- antibodies-online: Search results for available LOC401093 related products ranked by validation data
- antibodies-online: Search results for available LOC401093 related products ranked by validation data
- antibodies-online: Search results for available LOC401093 related products ranked by validation data
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for MBNL1-AS1
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for MBNL1-AS1
- Search GeneCopoeia for miRNA 3'UTR Target clone products for MBNL1-AS1
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for MBNL1-AS1
Sources for MBNL1-AS1 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB