Aliases for MAPRE3-AS1 Gene

Subcategory (RNA class) for MAPRE3-AS1 Gene

lncRNA

Quality Score for this RNA gene is

15

Aliases for MAPRE3-AS1 Gene

  • MAPRE3 Antisense RNA 1 2 3
  • Novel Transcript 5
  • NONHSAG027294 94
  • HSALNG0013756 169
  • AC013472.1 5
  • Lnc-OST4-2 170

External Ids for MAPRE3-AS1 Gene

Summaries for MAPRE3-AS1 Gene

GeneCards Summary for MAPRE3-AS1 Gene

MAPRE3-AS1 (MAPRE3 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for MAPRE3-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MAPRE3-AS1 Gene

Genomics for MAPRE3-AS1 Gene

GeneHancer (GH) Regulatory Elements for MAPRE3-AS1 Gene

Promoters and enhancers for MAPRE3-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J027014 Promoter/Enhancer 0.5 EPDnew dbSUPER 750.6 +0.0 4 0.1 MAPRE3-AS1 MAPRE3 KHK ENSG00000230286
GH02J027069 Promoter/Enhancer 2.9 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 9.7 -64.7 -64723 20.9 E2F8 ZNF785 SIN3A ZNF24 ZBTB40 SP1 CTCF SIX5 ZBTB6 MLX KHK EMILIN1 OST4 NRBP1 GTF3C2 CAD SNX17 GPN1 ATRAID ENSG00000234072
GH02J026968 Promoter/Enhancer 2.2 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas 11.7 +44.1 44127 5 ZBTB40 RBPJ ZNF362 L3MBTL2 MNT ZNF148 RERE NKRF CSDE1 ZFX MAPRE3 KHK MAPRE3-AS1 ENSG00000230286 AGBL5 AGBL5-AS1 DPYSL5 EMILIN1 ATRAID SLC5A6
GH02J027090 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 9.8 -79.0 -79028 6.3 SIX5 FOXA1 MLX RBPJ SMARCE1 NR2F1 NR2F6 HCFC1 MIXL1 NFYC KHK AGBL5 CAD MAPRE3 CGREF1 ZNF513 SNX17 PPM1G GPN1 ENSG00000272056
GH02J027263 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE 9.4 -248.9 -248862 3.6 ZNF785 CTCF MLX RBPJ USF2 CREB1 NFYC MNT ZNF652 ELF3 SLC30A3 GTF3C2 SNX17 IFT172 SUPT7L UCN MPV17 CAD ENSG00000235267 SLC5A6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MAPRE3-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MAPRE3-AS1 Gene

Genomic Locations for MAPRE3-AS1 Gene
chr2:26,979,572-27,014,739
(GRCh38/hg38)
Size:
35,168 bases
Orientation:
Minus strand

Genomic View for MAPRE3-AS1 Gene

Genes around MAPRE3-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MAPRE3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MAPRE3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MAPRE3-AS1 Gene

Proteins for MAPRE3-AS1 Gene

Post-translational modifications for MAPRE3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MAPRE3-AS1 Gene

Domains & Families for MAPRE3-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MAPRE3-AS1 Gene

Function for MAPRE3-AS1 Gene

Phenotypes From GWAS Catalog for MAPRE3-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MAPRE3-AS1 Gene

Localization for MAPRE3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MAPRE3-AS1 Gene

Pathways & Interactions for MAPRE3-AS1 Gene

PathCards logo

SuperPathways for MAPRE3-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for MAPRE3-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MAPRE3-AS1 Gene

Drugs & Compounds for MAPRE3-AS1 Gene

No Compound Related Data Available

Transcripts for MAPRE3-AS1 Gene

mRNA/cDNA for MAPRE3-AS1 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(6) RNACentral transcripts :
(4) LncBook transcripts :
(5) NONCODE transcripts :
(5) LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for MAPRE3-AS1 Gene

No ASD Table

Relevant External Links for MAPRE3-AS1 Gene

GeneLoc Exon Structure for
MAPRE3-AS1
ECgene alternative splicing isoforms for
MAPRE3-AS1

Expression for MAPRE3-AS1 Gene

SOURCE GeneReport for Unigene cluster for MAPRE3-AS1 Gene:

Hs.666730
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MAPRE3-AS1 Gene

Orthologs for MAPRE3-AS1 Gene

Evolution for MAPRE3-AS1 Gene

ENSEMBL:
Gene Tree for MAPRE3-AS1 (if available)
TreeFam:
Gene Tree for MAPRE3-AS1 (if available)

No data available for Orthologs for MAPRE3-AS1 Gene

Paralogs for MAPRE3-AS1 Gene

No data available for Paralogs for MAPRE3-AS1 Gene

Variants for MAPRE3-AS1 Gene

Sequence variations from dbSNP and Humsavar for MAPRE3-AS1 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000072175 -- 26,991,802(-) G/A intron_variant
rs1000085694 -- 26,985,023(-) A/G intron_variant
rs1000210276 -- 27,014,599(-) C/A upstream_transcript_variant
rs1000266984 -- 27,013,324(-) C/T intron_variant
rs1000481438 -- 27,006,634(-) A/G intron_variant

Additional Variant Information for MAPRE3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MAPRE3-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MAPRE3-AS1 Gene

Disorders for MAPRE3-AS1 Gene

No disorders were found for MAPRE3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for MAPRE3-AS1 Gene

Publications for MAPRE3-AS1 Gene

No publications were found for MAPRE3-AS1 Gene.

No data available for External Links for MAPRE3-AS1 Gene

Products for MAPRE3-AS1 Gene

Sources for MAPRE3-AS1 Gene