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Aliases for MAPK6-DT Gene

Subcategory (RNA class) for MAPK6-DT Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for MAPK6-DT Gene

  • MAPK6 Divergent Transcript 2
  • AC090970.2 5

External Ids for MAPK6-DT Gene

Summaries for MAPK6-DT Gene

GeneCards Summary for MAPK6-DT Gene

MAPK6-DT (MAPK6 Divergent Transcript) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for MAPK6-DT Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MAPK6-DT Gene

Genomics for MAPK6-DT Gene

GeneHancer (GH) Regulatory Elements for MAPK6-DT Gene

Promoters and enhancers for MAPK6-DT Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J052018 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 650.7 -1.8 -1773 5.6 CLOCK MLX ZFP64 DMAP1 IRF4 YY1 SLC30A9 E2F8 ZNF143 SP3 MAPK6 MAPK6-DT ENSG00000259935 ENSG00000259712 ENSG00000260618 FAM214A BCL2L10 LYSMD2 DMXL2 ENSG00000259398
GH15J052012 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +5.5 5495 2 PKNOX1 STAT5A BATF IRF4 EGR1 FOS ATF7 ETV6 IKZF2 RUNX3 MAPK6 DMXL2 ENSG00000274528 MAPK6-DT GC15P052002
GH15J052010 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +7.6 7621 1.9 PKNOX1 SMAD1 FEZF1 BATF FOS BCLAF1 RUNX3 JUNB CEBPB ZNF592 ENSG00000259935 ENSG00000260618 FAM214A ENSG00000259712 LEO1 GNB5 MYO5C ENSG00000274528 GC15P052002 MAPK6-DT
GH15J052031 Enhancer 0.9 ENCODE dbSUPER 0.4 -12.6 -12607 1.2 MXI1 ESRRA JUN MAX CEBPG BMI1 RFX5 CTBP1 GATA3 ZNF207 ENSG00000259709 ENSG00000259398 MAPK6-DT GC15P052002 MAPK6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MAPK6-DT on UCSC Golden Path with GeneCards custom track

Genomic Locations for MAPK6-DT Gene

Genomic Locations for MAPK6-DT Gene
chr15:52,010,999-52,019,095
(GRCh38/hg38)
Size:
8,097 bases
Orientation:
Minus strand
chr15:52,303,196-52,311,292
(GRCh37/hg19)
Size:
8,097 bases
Orientation:
Minus strand

Genomic View for MAPK6-DT Gene

Genes around MAPK6-DT on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MAPK6-DT Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MAPK6-DT Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for MAPK6-DT Gene

Function for MAPK6-DT Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MAPK6-DT Gene

Localization for MAPK6-DT Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MAPK6-DT Gene

Pathways & Interactions for MAPK6-DT Gene

SuperPathways for MAPK6-DT Gene

No Data Available

Interacting Proteins for MAPK6-DT Gene

Gene Ontology (GO) - Biological Process for MAPK6-DT Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MAPK6-DT Gene

Drugs & Compounds for MAPK6-DT Gene

No Compound Related Data Available

Transcripts for MAPK6-DT Gene

mRNA/cDNA for MAPK6-DT Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for MAPK6-DT Gene

No ASD Table

Relevant External Links for MAPK6-DT Gene

GeneLoc Exon Structure for
MAPK6-DT
ECgene alternative splicing isoforms for
MAPK6-DT

Expression for MAPK6-DT Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MAPK6-DT Gene

Orthologs for MAPK6-DT Gene

Evolution for MAPK6-DT Gene

ENSEMBL:
Gene Tree for MAPK6-DT (if available)
TreeFam:
Gene Tree for MAPK6-DT (if available)

No data available for Orthologs for MAPK6-DT Gene

Paralogs for MAPK6-DT Gene

No data available for Paralogs for MAPK6-DT Gene

Variants for MAPK6-DT Gene

Additional Variant Information for MAPK6-DT Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MAPK6-DT

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MAPK6-DT Gene

Disorders for MAPK6-DT Gene

No disorders were found for MAPK6-DT Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for MAPK6-DT Gene

Publications for MAPK6-DT Gene

  1. LncMAPK6 drives MAPK6 expression and liver TIC self-renewal. (PMID: 29764463) Huang G … Jian Z (Journal of experimental & clinical cancer research : CR 2018) 2 58

Products for MAPK6-DT Gene

Sources for MAPK6-DT Gene

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