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MAPK10-AS1 (MAPK10 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH04J086117 | Enhancer | 0.6 | Ensembl ENCODE | 607.7 | +0.2 | 248 | 2 | ATF7 SP1 RFX1 JUND FOSL2 POLR2A | MAPK10-AS1 lnc-SLC10A6-5 piR-33432-389 MAPK10 PTPN13 ARHGAP24 | |
GH04J085700 | Enhancer | 1.1 | FANTOM5 ENCODE dbSUPER | 4.8 | -416.5 | -416502 | 2.7 | BACH1 RELA TCF12 IKZF2 TRIM22 ARID3A DPF2 RELB RUNX3 BCL11A | ARHGAP24 MAPK10-AS1 KR153194-149 MIR4451 PTPN13 | |
GH04J086108 | Enhancer | 0.5 | Ensembl | 7.4 | -9.5 | -9511 | 0.8 | GATAD2A JUND ZNF792 ATF1 POLR2A | MAPK10-AS1 lnc-SLC10A6-5 lnc-SLC10A6-6 MAPK10 PTPN13 ARHGAP24 | |
GH04J085702 | Enhancer | 0.6 | FANTOM5 ENCODE dbSUPER | 4.8 | -414.6 | -414597 | 0.9 | ATF2 | MAPK10-AS1 MIR4451 KR153194-149 ARHGAP24 PTPN13 | |
GH04J085711 | Enhancer | 0.3 | Ensembl dbSUPER | 4.8 | -405.7 | -405711 | 2 | MAPK10-AS1 MIR4451 KR153194-149 ARHGAP24 PTPN13 |
RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
---|---|---|---|---|
URS00005943FB_9606 | lncRNA | 1049 | 4 |
Ensembl: ENST00000511917 (view in UCSC) , LncBook: HSALNT0074631, LNCipedia: lnc-ARHGAP24-1:2, NONCODE: NONHSAT097274.2, |
URS0000258187_9606 | lncRNA | 766 | 4 |
Ensembl: ENST00000509322 (view in UCSC) , LncBook: HSALNT0074627, LNCipedia: lnc-ARHGAP24-1:1, NONCODE: NONHSAT097273.2, |
URS000075C0BC_9606 | lncRNA | 957 | 2 |
HGNC: 40359, RefSeq: NR_110879, |
URS00008B65F3_9606 | lncRNA | 972 | 2 |
LNCipedia: lnc-ARHGAP24-1:3, NONCODE: NONHSAT097275.2, |
URS00009BA1A2_9606 | lncRNA | 1100 | 1 |
NONCODE: NONHSAT198793.1, |
SNP ID | Clinical significance and condition | Chr 04 pos | Variation | AA Info | Type |
---|---|---|---|---|---|
793018 | Likely Benign: not provided | 86,194,378(+) | G/A | SYNONYMOUS_VARIANT,FIVE_PRIME_UTR_VARIANT | |
rs141835386 | Uncertain Significance: not specified | 86,194,381(+) | G/T | NONSENSE,FIVE_PRIME_UTR_VARIANT | |
rs373751964 | Uncertain Significance: Epileptic encephalopathy | 86,159,291(+) | C/T | INTRON_VARIANT |
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
dgv25e194 | CNV | deletion | 18987734 |
esv2727932 | CNV | deletion | 23290073 |
esv2727933 | CNV | deletion | 23290073 |
esv2759263 | CNV | loss | 17122850 |
esv3564186 | CNV | deletion | 23714750 |
esv3564187 | CNV | deletion | 23714750 |
esv5249 | CNV | loss | 18987735 |
nsv1003585 | CNV | loss | 25217958 |
nsv1005338 | CNV | loss | 25217958 |
nsv1008773 | CNV | loss | 25217958 |
nsv1073348 | CNV | deletion | 25765185 |
nsv1148441 | CNV | deletion | 26484159 |
nsv291104 | CNV | deletion | 16902084 |
nsv4408 | CNV | insertion | 18451855 |
nsv594786 | CNV | gain | 21841781 |
nsv956395 | CNV | deletion | 24416366 |
No disorders were found for MAPK10-AS1 Gene.