Aliases for MAP3K2-DT Gene

Subcategory (RNA class) for MAP3K2-DT Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for MAP3K2-DT Gene

  • MAP3K2 Divergent Transcript 2 3 5
  • NONHSAG029187 92
  • HSALNG0018617 167
  • NONHSAG029188 92
  • Lnc-PROC-1 168
  • MAP3K2-DT 2

External Ids for MAP3K2-DT Gene

Summaries for MAP3K2-DT Gene

GeneCards Summary for MAP3K2-DT Gene

MAP3K2-DT (MAP3K2 Divergent Transcript) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for MAP3K2-DT Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MAP3K2-DT Gene

Genomics for MAP3K2-DT Gene

GeneHancer (GH) Regulatory Elements for MAP3K2-DT Gene

Promoters and enhancers for MAP3K2-DT Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J127385 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 79.6 +9.7 9746 6.5 ZBTB40 EP300 NRF1 POLR2G USF1 NCOR1 GTF2E2 PHF8 ZFX ZBTB5 MAP3K2 MAP3K2-DT ERCC3 AMMECR1L WDR33 GPR17 UGGT1 SFT2D3
GH02J127377 Enhancer 0.2 dbSUPER 500.7 -0.1 -117 1.2 MAP3K2-DT ERCC3 PROC ENSG00000231731 MAP3K2 RF00994-515
GH02J127215 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE CraniofacialAtlas 45.6 -159.4 -159417 5.8 ZNF217 TCF12 MYC ZBTB26 RFX1 KLF4 EP300 CTBP1 EZH2 POLR2A lnc-ERCC3-1 MAP3K2-DT ERCC3 MAP3K2 CYP27C1
GH02J127348 Enhancer 0.8 Ensembl dbSUPER 88.5 -29.4 -29427 8.2 ZNF10 OSR2 NCOR1 FOXA2 TRIM24 YBX1 TAL1 TCF12 ATF4 MEIS2 MAP3K2-DT ERCC3 MAP3K2 PROC ENSG00000231731 RNU4-48P LIMS2 piR-36393-296 RF00026-571 RNU6-1147P
GH02J127397 Enhancer 1.2 Ensembl ENCODE dbSUPER 56.6 +20.5 20472 2 TCF12 JUND FOS MYC CTBP1 JUN SKI KLF9 NFIC ZBTB17 MAP3K2-DT ENSG00000287742 MAP3K2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MAP3K2-DT on UCSC Golden Path with GeneCards custom track

Genomic Locations for MAP3K2-DT Gene

Genomic Locations for MAP3K2-DT Gene
chr2:127,378,128-127,408,051
(GRCh38/hg38)
Size:
29,924 bases
Orientation:
Plus strand
chr2:128,145,477-128,146,987
(GRCh37/hg19)
Size:
1,511 bases
Orientation:
Plus strand

Genomic View for MAP3K2-DT Gene

Genes around MAP3K2-DT on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MAP3K2-DT Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MAP3K2-DT Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MAP3K2-DT Gene

Proteins for MAP3K2-DT Gene

Post-translational modifications for MAP3K2-DT Gene

No Post-translational modifications

No data available for DME Specific Peptides for MAP3K2-DT Gene

Domains & Families for MAP3K2-DT Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MAP3K2-DT Gene

Function for MAP3K2-DT Gene

Phenotypes From GWAS Catalog for MAP3K2-DT Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MAP3K2-DT Gene

Localization for MAP3K2-DT Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MAP3K2-DT Gene

Pathways & Interactions for MAP3K2-DT Gene

PathCards logo

SuperPathways for MAP3K2-DT Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for MAP3K2-DT Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MAP3K2-DT Gene

Drugs & Compounds for MAP3K2-DT Gene

No Compound Related Data Available

Transcripts for MAP3K2-DT Gene

mRNA/cDNA for MAP3K2-DT Gene

24 RNACentral transcripts :
3 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
7 NONCODE transcripts :
6 LncBook transcripts :
22 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for MAP3K2-DT Gene

No ASD Table

Relevant External Links for MAP3K2-DT Gene

GeneLoc Exon Structure for
MAP3K2-DT

Expression for MAP3K2-DT Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for MAP3K2-DT

SOURCE GeneReport for Unigene cluster for MAP3K2-DT Gene:

Hs.729372
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MAP3K2-DT Gene

Orthologs for MAP3K2-DT Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for MAP3K2-DT Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia LOC459592 30
  • 98.39 (n)
Species where no ortholog for MAP3K2-DT was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MAP3K2-DT Gene

ENSEMBL:
Gene Tree for MAP3K2-DT (if available)
TreeFam:
Gene Tree for MAP3K2-DT (if available)

Paralogs for MAP3K2-DT Gene

No data available for Paralogs for MAP3K2-DT Gene

Variants for MAP3K2-DT Gene

Additional dbSNP identifiers (rs#s) for MAP3K2-DT Gene

Additional Variant Information for MAP3K2-DT Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MAP3K2-DT

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MAP3K2-DT Gene

Disorders for MAP3K2-DT Gene

No disorders were found for MAP3K2-DT Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for MAP3K2-DT Gene

Publications for MAP3K2-DT Gene

  1. Aberrant expression of long noncoding RNAs in cumulus cells isolated from PCOS patients. (PMID: 26650608) Huang X … Dai H (Journal of assisted reproduction and genetics 2016) 2 3 54

Products for MAP3K2-DT Gene

Sources for MAP3K2-DT Gene