MAP1LC3P Gene (Pseudogene)

Microtubule Associated Protein 1 Light Chain 3 Pseudogene

GC18P054954
GIFtS:
6
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Aliases for MAP1LC3P Gene

Aliases for MAP1LC3P Gene

  • Microtubule Associated Protein 1 Light Chain 3 Pseudogene 2 3 5
  • HsT312 2 3
  • MAP1LC3P 5

External Ids for MAP1LC3P Gene

Previous GeneCards Identifiers for MAP1LC3P Gene

  • GC00U914009
  • GC18U900205
  • GC18P050772
  • GC18P052621

Summaries for MAP1LC3P Gene

GeneCards Summary for MAP1LC3P Gene

MAP1LC3P (Microtubule Associated Protein 1 Light Chain 3 Pseudogene) is a Pseudogene.

Additional gene information for MAP1LC3P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MAP1LC3P Gene

Genomics for MAP1LC3P Gene

Genomic Locations for MAP1LC3P Gene

Latest Assembly
chr18:54,954,403-54,955,037
(GRCh38/hg38)
Size:
635 bases
Orientation:
Plus strand

Previous Assembly
chr18:52,621,644-52,622,268
(GRCh37/hg19 by Entrez Gene)
Size:
625 bases
Orientation:
Plus strand

chr18:52,621,634-52,621,963
(GRCh37/hg19 by Ensembl)
Size:
330 bases
Orientation:
Plus strand

Genomic View for MAP1LC3P Gene

Genes around MAP1LC3P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MAP1LC3P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MAP1LC3P Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for MAP1LC3P Gene

No data available for GeneHancer (GH) Regulatory Elements for MAP1LC3P Gene

Proteins for MAP1LC3P Gene

Products:

  1. Antibodies for research
  2. Protein products for research
  3. Assay products for research

Post-translational modifications for MAP1LC3P Gene

No Post-translational modifications

No data available for DME Specific Peptides for MAP1LC3P Gene

Domains & Families for MAP1LC3P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MAP1LC3P Gene

Function for MAP1LC3P Gene

Products:

  1. Animal Models for research
  2. CRISPR products for research
  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MAP1LC3P Gene

Localization for MAP1LC3P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MAP1LC3P Gene

Pathways & Interactions for MAP1LC3P Gene

PathCards logo

SuperPathways for MAP1LC3P Gene

No Data Available

Gene Ontology (GO) - Biological Process for MAP1LC3P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MAP1LC3P Gene

Drugs & Compounds for MAP1LC3P Gene

Products:

  1. Drug products for research
No Compound Related Data Available

Transcripts for MAP1LC3P Gene

Products:

  1. CRISPR products for research
  2. miRNA products for research
  3. Inhibitory RNAs for research
  4. Clone products for research

mRNA/cDNA for MAP1LC3P Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MAP1LC3P Gene

No ASD Table

Relevant External Links for MAP1LC3P Gene

GeneLoc Exon Structure for
MAP1LC3P

Expression for MAP1LC3P Gene

Products:

  1. Primer products for research

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MAP1LC3P Gene

mRNA expression in normal human tissues for MAP1LC3P Gene
mRNA expression by GTEx for MAP1LC3P Gene
genes like me logo Genes that share expression patterns with MAP1LC3P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MAP1LC3P Gene

Orthologs for MAP1LC3P Gene

Evolution for MAP1LC3P Gene

ENSEMBL:
Gene Tree for MAP1LC3P (if available)
TreeFam:
Gene Tree for MAP1LC3P (if available)

No data available for Orthologs for MAP1LC3P Gene

Paralogs for MAP1LC3P Gene

No data available for Paralogs for MAP1LC3P Gene

Variants for MAP1LC3P Gene

Additional Variant Information for MAP1LC3P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MAP1LC3P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MAP1LC3P Gene

Disorders for MAP1LC3P Gene

Additional Disease Information for MAP1LC3P

Genetic Association Database
(GAD)

No disorders were found for MAP1LC3P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MAP1LC3P Gene

Publications for MAP1LC3P Gene

  1. Genome-wide association study identifies five new schizophrenia loci. (PMID: 21926974) Schizophrenia Psychiatric Genome-Wide Association Study (GWAS) Consortium (Nature genetics 2011) 41
  2. Framingham Heart Study 100K Project: genome-wide associations for blood pressure and arterial stiffness. (PMID: 17903302) Levy D … Mitchell GF (BMC medical genetics 2007) 41
  3. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 41

No data available for Mastermind for MAP1LC3P Gene

Products for MAP1LC3P Gene

Sources for MAP1LC3P Gene