Aliases for MAP1LC3P Gene
Subcategory (RNA class) for MAP1LC3P Gene
antisense
External Ids for MAP1LC3P Gene
- HGNC: 31004
- Entrez Gene: 387615
- Ensembl: ENSG00000267647
ORGUL Members for MAP1LC3P Gene
Previous GeneCards Identifiers for MAP1LC3P Gene
- GC00U914009
- GC18U900205
- GC18P050772
- GC18P052621
Summaries for MAP1LC3P Gene
GeneCards Summary for MAP1LC3P Gene
MAP1LC3P (Microtubule Associated Protein 1 Light Chain 3 Pseudogene) is a Pseudogene, and is affiliated with the antisense RNA class.
Additional gene information for MAP1LC3P Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MAP1LC3P Gene
Genomics for MAP1LC3P Gene
GeneHancer (GH) Regulatory Elements for MAP1LC3P Gene
Promoters and enhancers for MAP1LC3P Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH18J054945 | Enhancer | 1 | ENCODE | 0.4 | -7.2 | -7158 | 3.9 | ZNF652 ELF3 CBFA2T2 ZNF148 CEBPG RERE ZNF24 TFE3 TRIM24 SP1 | CCDC68 STARD6 MAP1LC3P ENSG00000267112 | |
| GH18J054951 | Enhancer | 0.3 | Ensembl | 0.7 | -2.2 | -2202 | 0.8 | ZNF664 | CCDC68 ENSG00000267311 MAP1LC3P ENSG00000267112 | |
| GH18J054949 | Enhancer | 0.2 | Ensembl | 0.7 | -4.6 | -4602 | 0.4 | MAP1LC3P CCDC68 ENSG00000267112 | ||
| GH18J054930 | Enhancer | 0.2 | Ensembl | 0.3 | -23.5 | -23502 | 0.2 | CCDC68 MAP1LC3P ENSG00000267112 | ||
| GH18J054902 | Enhancer | 0.2 | Ensembl | 0.2 | -51.7 | -51702 | 0.2 | ENSG00000267112 MAP1LC3P CCDC68 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around MAP1LC3P on UCSC Golden Path with GeneCards custom track
Genomic Locations for MAP1LC3P Gene
Genomic Locations for MAP1LC3P Gene
- chr18:54,954,403-54,955,037
- (GRCh38/hg38)
- Size:
- 635 bases
- Orientation:
- Plus strand
- chr18:52,621,634-52,622,268
- (GRCh37/hg19)
- Size:
- 635 bases
- Orientation:
- Plus strand
Genomic View for MAP1LC3P Gene
Genes around MAP1LC3P on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 18q21.2 by HGNC
- 18q21.2 by Entrez Gene
- 18q21.2 by Ensembl
MAP1LC3P Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for MAP1LC3P Gene
Proteins for MAP1LC3P Gene
Post-translational modifications for MAP1LC3P Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for MAP1LC3P
- Origene Custom Protein Services for MAP1LC3P
No data available for DME Specific Peptides for MAP1LC3P Gene
Domains & Families for MAP1LC3P Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MAP1LC3P Gene
Function for MAP1LC3P Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for MAP1LC3P
-
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for MAP1LC3P - Now 50% OFF >
- * MAP1LC3P CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * MAP1LC3P CRISPR applications: KO, Activation, Repression, and more - Browse All
- Browse CRISPR knockouts for MAP1LC3P
miRNA Products
Inhibitory RNA Products
Clone Products
- Applied Biological Materials (abm): Clones for MAP1LC3P - Now 50% OFF >
- * MAP1LC3P as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * MAP1LC3P tags and reporters available: His, HA, Myc, Flag, GFP, RFP, Luciferase - Browse All
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MAP1LC3P Gene
Localization for MAP1LC3P Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MAP1LC3P Gene
Transcripts for MAP1LC3P Gene
mRNA/cDNA for MAP1LC3P Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000588023 330 bps (ENST00000588023.1)
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for MAP1LC3P - Now 50% OFF >
- * MAP1LC3P CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * MAP1LC3P CRISPR applications: KO, Activation, Repression, and more - Browse All
- Browse CRISPR knockouts for MAP1LC3P
miRNA Products
Inhibitory RNA Products
Clone Products
- Applied Biological Materials (abm): Clones for MAP1LC3P - Now 50% OFF >
- * MAP1LC3P as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * MAP1LC3P tags and reporters available: His, HA, Myc, Flag, GFP, RFP, Luciferase - Browse All
Expression for MAP1LC3P Gene
NURSA nuclear receptor signaling pathways regulating expression of MAP1LC3P Gene:
MAP1LC3P
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MAP1LC3P Gene
Orthologs for MAP1LC3P Gene
No data available for Orthologs for MAP1LC3P Gene
Paralogs for MAP1LC3P Gene
No data available for Paralogs for MAP1LC3P Gene
Variants for MAP1LC3P Gene
Additional Variant Information for MAP1LC3P Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- MAP1LC3P
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MAP1LC3P Gene
Disorders for MAP1LC3P Gene
Additional Disease Information for MAP1LC3P
- Genetic Association Database
- (GAD)
No disorders were found for MAP1LC3P Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MAP1LC3P Gene
Publications for MAP1LC3P Gene
- Genome-wide association study identifies five new schizophrenia loci. (PMID: 21926974) Schizophrenia Psychiatric Genome-Wide Association Study (GWAS) Consortium (Nature genetics 2011) 45 58
- A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 45 58
- Framingham Heart Study 100K Project: genome-wide associations for blood pressure and arterial stiffness. (PMID: 17903302) Levy D … Mitchell GF (BMC medical genetics 2007) 45 58
No data available for External Links for MAP1LC3P Gene
Products for MAP1LC3P Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for MAP1LC3P
- Origene Custom Protein Services for MAP1LC3P
- Browse OriGene Inhibitory RNA Products For MAP1LC3P
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for MAP1LC3P
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For MAP1LC3P
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Cyagen custom Knockout/knockin (KOKI) mouse models for MAP1LC3P
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for MAP1LC3P
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for MAP1LC3P
- Search GeneCopoeia for miRNA 3'UTR Target clone products for MAP1LC3P
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for MAP1LC3P
Sources for MAP1LC3P Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) UniGene
- (28) AceView
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) HGMD
- (45) GAD
- (46) BGMUT
- (47) HuGE
- (48) Atlas
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) OCA
- (69) Proteopedia
- (70) MOPED
- (71) neXtProt
- (72) Reactome
- (73) GeneGo (Thomson Reuters)
- (74) fRNAdb
- (75) DISEASES
- (76) SIMAP
- (77) GenomeRNAi
- (78) LifeMap
- (79) miRTarBase
- (80) MalaCards
- (81) Invitrogen
- (82) BitterDB
- (83) ESI-BIO
- (84) RefSeq
- (85) BioSystems
- (86) MaxQB
- (87) IUPHAR
- (88) BioGPS
- (89) Illumina
- (90) COMPARTMENTS
- (91) HOMER
- (92) PaxDb
- (93) ApexBio
- (94) Addgene
- (95) antibodies-online
- (96) CYP
- (97) NONCODE
- (98) SwitchGear Genomics
- (99) TreeFam
- (100) PathCards
- (101) GeneReviews
- (102) GeneTex
- (103) Taconic Biosciences
- (104) GTEx
- (105) ProteomicsDB
- (106) SCBT
- (107) DGIdb
- (108) ClinicalTrials
- (109) FDA Approved Drugs
- (110) RVIS
- (111) SIGNOR
- (112) diseasecard
- (113) NIH Rare Diseases
- (114) Orphanet
- (115) UMLS
- (116) GTR
- (117) Disease Ontology
- (118) Genetics Home Reference
- (119) MeSH
- (120) MedlinePlus
- (121) CDC
- (122) NINDS
- (123) NCBI Bookshelf
- (124) ClinVar
- (125) Gene Damage Index
- (126) ViGene Biosciences
- (127) HPO
- (128) UDN
- (129) VISTA
- (130) FANTOM5
- (131) ENCODE
- (132) ProSci
- (133) Horizon
- (134) NURSA
- (135) IID
- (136) Cyagen
- (137) VectorBuilder
- (138) SNPedia
- (139) BRCA Exchange
- (140) St John's Lab
- (141) CIViC
- (142) ProteoGenix
- (143) dbSUPER
- (144) TISSUES
- (145) Gene ORGANizer
- (146) abm
- (147) CrownBio
- (148) Human Protein Atlas
- (149) GWAS Catalog
- (150) Monarch Initiative
- (151) DataMed
- (152) HumanCyc
- (153) genomics-online
- (154) UCNEbase
- (155) EPDnew
- (156) Applied Biosystems
- (157) GlyConnect
- (158) Aminode
- (159) GeneCopoeia
- (160) GPS-Prot
- (161) RNACentral
- (162) LncRNADisease
- (163) LOVD
- (164) miR2Disease
- (165) DiseaseEnhancer
- (166) Boster Bio
- (167) Biorbyt
- (168) Biocompare
- (169) Mastermind