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Aliases for MAGI2-AS2 Gene

Subcategory (RNA class) for MAGI2-AS2 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for MAGI2-AS2 Gene

  • MAGI2 Antisense RNA 2 2 3 5
  • MAGI2 Antisense RNA 2 (Non-Protein Coding) 2

External Ids for MAGI2-AS2 Gene

Previous GeneCards Identifiers for MAGI2-AS2 Gene

  • GC00U933420
  • GC07P078639

Summaries for MAGI2-AS2 Gene

GeneCards Summary for MAGI2-AS2 Gene

MAGI2-AS2 (MAGI2 Antisense RNA 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for MAGI2-AS2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MAGI2-AS2 Gene

Genomics for MAGI2-AS2 Gene

GeneHancer (GH) Regulatory Elements for MAGI2-AS2 Gene

Promoters and enhancers for MAGI2-AS2 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I079055 Enhancer 0.5 ENCODE 11.2 +47.0 47003 0.3 CTBP1 GATA3 NFIB ZNF384 MAGI2-AS2 RNU6-337P LOC100421387 MAGI2
GH07I079056 Enhancer 0.5 ENCODE 11.2 +47.3 47272 0.2 CTBP1 GATA3 NFIB ZNF384 MAGI2-AS2 RNU6-337P LOC100421387 MAGI2
GH07I078983 Enhancer 0.3 FANTOM5 11 -24.8 -24834 0.4 MAGI2-AS2 MAGI2 MAGI2-AS1
GH07I078852 Enhancer 0.3 ENCODE 10.6 -155.0 -155000 2.7 ZNF384 MAGI2-AS2 MAGI2-AS1 GC07P078753 MAGI2
GH07I078782 Enhancer 0.2 FANTOM5 10.5 -226.1 -226066 0.2 MAGI2-AS2 GC07P078753 MAGI2-AS1 GC07P078476 MAGI2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MAGI2-AS2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MAGI2-AS2 Gene

Genomic Locations for MAGI2-AS2 Gene
3,290 bases
Plus strand

Genomic View for MAGI2-AS2 Gene

Genes around MAGI2-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MAGI2-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MAGI2-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MAGI2-AS2 Gene

Proteins for MAGI2-AS2 Gene

Post-translational modifications for MAGI2-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MAGI2-AS2 Gene

Domains & Families for MAGI2-AS2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MAGI2-AS2 Gene

Function for MAGI2-AS2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MAGI2-AS2 Gene

Localization for MAGI2-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MAGI2-AS2 Gene

Pathways & Interactions for MAGI2-AS2 Gene

SuperPathways for MAGI2-AS2 Gene

No Data Available

Interacting Proteins for MAGI2-AS2 Gene

Gene Ontology (GO) - Biological Process for MAGI2-AS2 Gene


No data available for Pathways by source and SIGNOR curated interactions for MAGI2-AS2 Gene

Drugs & Compounds for MAGI2-AS2 Gene

No Compound Related Data Available

Transcripts for MAGI2-AS2 Gene

mRNA/cDNA for MAGI2-AS2 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MAGI2-AS2 Gene

MAGI2 antisense RNA 2:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MAGI2-AS2 Gene

No ASD Table

Relevant External Links for MAGI2-AS2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MAGI2-AS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MAGI2-AS2 Gene

mRNA differential expression in normal tissues according to GTEx for MAGI2-AS2 Gene

This gene is overexpressed in Testis (x37.2).

SOURCE GeneReport for Unigene cluster for MAGI2-AS2 Gene:

genes like me logo Genes that share expression patterns with MAGI2-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MAGI2-AS2 Gene

Orthologs for MAGI2-AS2 Gene

Evolution for MAGI2-AS2 Gene

Gene Tree for MAGI2-AS2 (if available)
Gene Tree for MAGI2-AS2 (if available)

No data available for Orthologs for MAGI2-AS2 Gene

Paralogs for MAGI2-AS2 Gene

No data available for Paralogs for MAGI2-AS2 Gene

Variants for MAGI2-AS2 Gene

Sequence variations from dbSNP and Humsavar for MAGI2-AS2 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000364916 -- 79,007,315(+) T/C upstream_transcript_variant
rs1001306678 -- 79,011,903(+) T/A intron_variant
rs1001374729 -- 79,010,646(+) G/T intron_variant
rs1001654725 -- 79,012,253(+) A/G non_coding_transcript_variant
rs1001786100 -- 79,012,695(+) G/C downstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MAGI2-AS2 Gene

Variant ID Type Subtype PubMed ID
nsv831040 CNV gain 17160897
nsv607659 CNV gain 21841781
nsv5803 CNV insertion 18451855
nsv521257 CNV loss 19592680
nsv471642 CNV loss 15918152

Additional Variant Information for MAGI2-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MAGI2-AS2 Gene

Disorders for MAGI2-AS2 Gene

Additional Disease Information for MAGI2-AS2

No disorders were found for MAGI2-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MAGI2-AS2 Gene

Publications for MAGI2-AS2 Gene

No publications were found for MAGI2-AS2 Gene.

Products for MAGI2-AS2 Gene

Sources for MAGI2-AS2 Gene

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