Aliases for MAGEA3 Gene
Aliases for MAGEA3 Gene
External Ids for MAGEA3 Gene
- HGNC: 6801
- Entrez Gene: 4102
- Ensembl: ENSG00000221867
- OMIM: 300174
- UniProtKB: P43357
Previous HGNC Symbols for MAGEA3 Gene
- MAGE3
Previous GeneCards Identifiers for MAGEA3 Gene
- GC0XM146274
- GC0XM148591
- GC0XM149682
- GC0XM150552
- GC0XM151605
- GC0XM151685
- GC0XM151934
- GC0XM140736
Summaries for MAGEA3 Gene
-
This gene is a member of the MAGEA gene family. The members of this family encode proteins with 50 to 80% sequence identity to each other. The promoters and first exons of the MAGEA genes show considerable variability, suggesting that the existence of this gene family enables the same function to be expressed under different transcriptional controls. The MAGEA genes are clustered at chromosomal location Xq28. They have been implicated in some hereditary disorders, such as dyskeratosis congenita. [provided by RefSeq, Jul 2008]
GeneCards Summary for MAGEA3 Gene
MAGEA3 (MAGE Family Member A3) is a Protein Coding gene. Diseases associated with MAGEA3 include Melanoma and Squamous Cell Carcinoma. Among its related pathways are NF-kappaB Signaling. An important paralog of this gene is MAGEA6.
UniProtKB/Swiss-Prot for MAGEA3 Gene
-
Proposed to enhance ubiquitin ligase activity of RING-type zinc finger-containing E3 ubiquitin-protein ligases. May enhance ubiquitin ligase activity of TRIM28 and stimulate p53/TP53 ubiquitination by TRIM28. Proposed to act through recruitment and/or stabilization of the Ubl-conjugating enzyme (E2) at the E3:substrate complex. May play a role in embryonal development and tumor transformation or aspects of tumor progression. In vitro promotes cell viability in melanoma cell lines. Antigen recognized on a melanoma by autologous cytolytic T-lymphocytes.
Additional gene information for MAGEA3 Gene
No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MAGEA3 Gene
Genomics for MAGEA3 Gene
GeneHancer (GH) Regulatory Elements for MAGEA3 Gene
Promoters and enhancers for MAGEA3 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH0XJ152698 | Promoter | 0.5 | EPDnew | 650.7 | +0.0 | 19 | 0.1 | MAGEA3 LOC105373370 MAGEA2B GC0XM152591 | ||
| GH0XJ152699 | Promoter | 0.5 | EPDnew | 650.7 | 0.0 | -46 | 0.1 | MAGEA3 LOC105373370 GABRA3 LOC100420250 GC0XM152591 | ||
| GH0XJ153383 | Enhancer | 0.7 | FANTOM5 | 10.9 | +684.7 | 684674 | 0.3 | GTF2F1 ZNF493 ZNF140 ZNF266 ZNF155 ZNF791 ZNF157 ADNP CBLL2 ZNF621 | HCFC1 EMD MAGEA1 ENSG00000234200 MAGEA6 MAGEA2B MAGEA3 ENSG00000260081 TMEM187 MECP2 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)
GeneHancers around MAGEA3 on UCSC Golden Path with GeneCards custom track
- Top Transcription factor binding sites by QIAGEN in the MAGEA3 gene promoter:
-
- p53
- MEF-2A
- MEF-2
- aMEF-2
- FOXJ2
- FOXJ2 (long isoform)
- MyoD
Regulatory Element Products
Genomic Locations for MAGEA3 Gene
Genomic Locations for MAGEA3 Gene
- chrX:152,698,732-152,702,347
- (GRCh38/hg38)
- Size:
- 3,616 bases
- Orientation:
- Plus strand
- chrX:151,934,652-151,938,240
- (GRCh37/hg19)
- Size:
- 3,589 bases
- Orientation:
- Minus strand
Genomic View for MAGEA3 Gene
Genes around MAGEA3 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- Xq28 by Entrez Gene
- Xq28 by HGNC
- Xq28 by Ensembl
MAGEA3 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for MAGEA3 Gene
Proteins for MAGEA3 Gene
-
Protein details for MAGEA3 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- P43357-MAGA3_HUMAN
- Recommended name:
- Melanoma-associated antigen 3
- Protein Accession:
- P43357
- Q6FHI6
Protein attributes for MAGEA3 Gene
- Size:
- 314 amino acids
- Molecular mass:
- 34747 Da
- Quaternary structure:
-
- Interacts with TRIM28.
Protein Expression for MAGEA3 Gene
Post-translational modifications for MAGEA3 Gene
Other Protein References for MAGEA3 Gene
- ENSEMBL proteins:
- REFSEQ proteins:
Antibody Products
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-
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Assay Products
No data available for DME Specific Peptides for MAGEA3 Gene
Domains & Families for MAGEA3 Gene
Gene Families for MAGEA3 Gene
- HGNC:
- Human Protein Atlas (HPA):
-
- Cancer-related genes
- Predicted intracellular proteins
Protein Domains for MAGEA3 Gene
- InterPro:
- Blocks:
- ProtoNet:
Suggested Antigen Peptide Sequences for MAGEA3 Gene
- GenScript: Design optimal peptide antigens:
Graphical View of Domain Structure for InterPro Entry
No data available for UniProtKB/Swiss-Prot for MAGEA3 Gene
Function for MAGEA3 Gene
Molecular function for MAGEA3 Gene
- UniProtKB/Swiss-Prot Function:
- Proposed to enhance ubiquitin ligase activity of RING-type zinc finger-containing E3 ubiquitin-protein ligases. May enhance ubiquitin ligase activity of TRIM28 and stimulate p53/TP53 ubiquitination by TRIM28. Proposed to act through recruitment and/or stabilization of the Ubl-conjugating enzyme (E2) at the E3:substrate complex. May play a role in embryonal development and tumor transformation or aspects of tumor progression. In vitro promotes cell viability in melanoma cell lines. Antigen recognized on a melanoma by autologous cytolytic T-lymphocytes.
- GENATLAS Biochemistry:
- human melanoma antigen,family A,member 3,expressed in melanoma,testis,advanced gastric carcinomas and hepatocellular carcinomas
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005515 | protein binding | IPI | 20864041 |
| GO:0089720 | caspase binding | IDA | 12097332 |
Phenotypes for MAGEA3 Gene
- GenomeRNAi human phenotypes for MAGEA3:
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miRNA for MAGEA3 Gene
- miRTarBase miRNAs that target MAGEA3
-
- hsa-mir-34a-5p (MIRT004111)
- hsa-let-7a-5p (MIRT760971)
- hsa-let-7b-5p (MIRT760984)
- hsa-let-7c-5p (MIRT760997)
- hsa-let-7d-5p (MIRT761008)
- hsa-let-7e-5p (MIRT761017)
- hsa-let-7f-5p (MIRT761031)
- hsa-let-7g-5p (MIRT761044)
- hsa-let-7i-5p (MIRT761054)
- hsa-mir-153-3p (MIRT762901)
- hsa-mir-202-3p (MIRT763682)
- hsa-mir-31-5p (MIRT765100)
- hsa-mir-3680-3p (MIRT766738)
- hsa-mir-4458 (MIRT769223)
- hsa-mir-448 (MIRT769707)
- hsa-mir-4500 (MIRT769803)
- hsa-mir-4775 (MIRT772221)
- hsa-mir-590-3p (MIRT775354)
- hsa-mir-624-3p (MIRT776093)
- hsa-mir-98-5p (MIRT783010)
miRNA Products
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No data available for Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for MAGEA3 Gene
Localization for MAGEA3 Gene
| Compartment | Confidence |
|---|---|
| endoplasmic reticulum | 4 |
| cytosol | 3 |
| nucleus | 2 |
| plasma membrane | 1 |
| extracellular | 1 |
| peroxisome | 1 |
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005783 | endoplasmic reticulum | IDA | 12097332 |
No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from the Human Protein Atlas (HPA) for MAGEA3 Gene
Pathways & Interactions for MAGEA3 Gene
| SuperPathway | Contained pathways | ||
|---|---|---|---|
| 1 | NF-kappaB Signaling | ||
Pathways by source for MAGEA3 Gene
1 Cell Signaling Technology pathway for MAGEA3 Gene
Interacting Proteins for MAGEA3 Gene
Selected Interacting proteins:
ENSP00000359301
P43357-MAGA3_HUMAN
for MAGEA3 Gene via
STRING
IID
UniProtKB
GPS-Prot Interaction Network for MAGEA3
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0010955 | negative regulation of protein processing | IDA | 12097332 |
| GO:0043154 | negative regulation of cysteine-type endopeptidase activity involved in apoptotic process | IDA | 12097332 |
| GO:1902236 | negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway | IMP | 12097332 |
No data available for SIGNOR curated interactions for MAGEA3 Gene
Drugs & Compounds for MAGEA3 Gene
| Name | Synonyms | Role | CAS Number | PubChem IDs | PubMed IDs |
|---|
Drug Products
Transcripts for MAGEA3 Gene
mRNA/cDNA for MAGEA3 Gene
- (5) REFSEQ mRNAs :
- (11) Additional mRNA sequences :
- (183) Selected AceView cDNA sequences:
- (3) Ensembl transcripts including schematic representations, and UCSC links where relevant :
-
- ENST00000370278 1724 bps (uc033faf.1)
- ENST00000417212 853 bps (uc065bro.1)
- ENST00000598245 1762 bps (uc065brp.1)
Unigene Clusters for MAGEA3 Gene
- Melanoma antigen family A, 3:
- Representative Sequences:
CRISPR Products
-
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Clone Products
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Expression for MAGEA3 Gene
mRNA expression in embryonic tissues and stem cells from LifeMap Discovery
-
Testis (Reproductive System)
- Spermatogonium Type B Seminiferous Tubules
-
Gonad
- Spermatogonium Type B Seminiferous Tubules
mRNA differential expression in normal tissues according to GTEx for MAGEA3 Gene
This gene is overexpressed in Testis (x49.5).
This gene is overexpressed in Bone (69.0).
Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MaxQB, and MOPED for MAGEA3 Gene
NURSA nuclear receptor signaling pathways regulating expression of MAGEA3 Gene:
MAGEA3SOURCE GeneReport for Unigene cluster for MAGEA3 Gene:
Hs.417816mRNA Expression by UniProt/SwissProt for MAGEA3 Gene:
P43357-MAGA3_HUMAN
Tissue specificity:
Expressed in many tumors of several types, such as melanoma, head and neck squamous cell carcinoma, lung carcinoma and breast carcinoma, but not in normal tissues except for testes and placenta. Never expressed in kidney tumors, Leukemias and lymphomas.
Evidence on tissue expression from TISSUES for MAGEA3 Gene
- Blood(4.5)
- Skin(4.4)
- Bone marrow(4.2)
- Lung(4.2)
- Lymph node(2.3)
- Spleen(2.1)
Primer Products
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OriGene qPCR primer pairs for MAGEA3
-
OriGene qPCR primer pairs and template standards for MAGEA3
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Gene Expression Assay Products
No data available for Phenotype-based relationships between genes and organs from Gene ORGANizer for MAGEA3 Gene
Orthologs for MAGEA3 Gene
This gene was present in the common ancestor of human and mouse.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| mouse (Mus musculus) |
Mammalia | Magea10 34 |
|
ManyToMany | |
| Magea6 34 |
|
ManyToMany | |||
| Magea8 34 |
|
ManyToMany | |||
| 1700080O16Rik 34 |
|
ManyToMany | |||
| Magea5 34 |
|
ManyToMany | |||
| 3830417A13Rik 34 |
|
ManyToMany | |||
| Magea1 34 |
|
ManyToMany | |||
| Magea3 34 |
|
ManyToMany | |||
| Magea2 34 |
|
ManyToMany | |||
| Magea4 34 |
|
ManyToMany |
- Species where no ortholog for MAGEA3 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- baker's yeast (Saccharomyces cerevisiae)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- chicken (Gallus gallus)
- chimpanzee (Pan troglodytes)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- cow (Bos Taurus)
- dog (Canis familiaris)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- fruit fly (Drosophila melanogaster)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- lizard (Anolis carolinensis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- oppossum (Monodelphis domestica)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- platypus (Ornithorhynchus anatinus)
- rainbow trout (Oncorhynchus mykiss)
- rat (Rattus norvegicus)
- rice (Oryza sativa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea squirt (Ciona intestinalis)
- sea squirt (Ciona savignyi)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- thale cress (Arabidopsis thaliana)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- tropical clawed frog (Silurana tropicalis)
- wheat (Triticum aestivum)
- worm (Caenorhabditis elegans)
- zebrafish (Danio rerio)
Evolution for MAGEA3 Gene
- ENSEMBL:
- Gene Tree for MAGEA3 (if available)
- TreeFam:
- Gene Tree for MAGEA3 (if available)
- Aminode:
- Evolutionary constrained regions (ECRs) for MAGEA3: view image
Paralogs for MAGEA3 Gene
Paralogs for MAGEA3 Gene
- MAGEA6 5
- MAGEA12 5
- MAGEA2B 5
- MAGEA2 5
- MAGEA4 5
- MAGEA1 5
- MAGEA8 5
- MAGEA11 5
- MAGEA9 5
- MAGEA9B 5
- MAGEA10 5
- MAGEB16 5
- MAGEB4 5
- MAGEB1 5
- MAGEB17 5
- MAGEC1 5
- MAGEB18 5
- MAGEB2 5
- MAGEC2 5
- MAGEB10 5
- MAGEB6 5
- MAGEB3 5
- MAGEB6B 5
- MAGEC3 5
- MAGEE1 5
- MAGEL2 5
- MAGED2 5
- TRO 5
- MAGEE2 5
- NSMCE3 5
- MAGED1 5
- MAGED4B 5
- MAGED4 5
- MAGEB5 5
- MAGEF1 5
- NDN 5
- MAGEA6 33
(38) SIMAP similar genes for MAGEA3 Gene using alignment to 2 proteins:
- MAGA3_HUMAN
- E7EMU0_HUMAN
Variants for MAGEA3 Gene
| SNP ID | Clin | Chr 0X pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs112483246 | -- | 152,696,937(+) | T/C | upstream_transcript_variant | |
| rs113065219 | -- | 152,697,495(+) | G/C | upstream_transcript_variant | |
| rs116616525 | -- | 152,701,826(+) | G/T | 3_prime_UTR_variant | |
| rs12846936 | -- | 152,701,642(+) | A/G | coding_sequence_variant, synonymous_variant | |
| rs137998711 | -- | 152,701,476(+) | G/C | coding_sequence_variant, missense_variant |
Residual Variation Intolerance Score:
95% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score:
1.24;
24.82% of all genes are more intolerant (likely to be disease-causing)
Additional Variant Information for MAGEA3 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- MAGEA3
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for MAGEA3 Gene
Disorders for MAGEA3 Gene
| Disorder | Aliases | PubMed IDs |
|---|---|---|
| melanoma |
|
|
| squamous cell carcinoma |
|
|
| femoral neuropathy |
|
|
| lung cancer |
|
|
| dyskeratosis congenita |
|
|
Search MAGEA3 in MalaCards
View complete list of genes associated with diseases
Additional Disease Information for MAGEA3
No data available for UniProtKB/Swiss-Prot and Genatlas for MAGEA3 Gene
Publications for MAGEA3 Gene
- Cloning and analysis of MAGE-1-related genes. (PMID: 8037761) Ding M … Fenton RG (Biochemical and biophysical research communications 1994) 3 4 22 58
- Human gene MAGE-3 codes for an antigen recognized on a melanoma by autologous cytolytic T lymphocytes. (PMID: 8113684) Gaugler B … Boon T (The Journal of experimental medicine 1994) 3 4 22 58
- Expression of tumor-specific antigen MAGE, GAGE and BAGE in ovarian cancer tissues and cell lines. (PMID: 20423514) Zhang S … Yu Y (BMC cancer 2010) 3 22 58
- MAGE-RING protein complexes comprise a family of E3 ubiquitin ligases. (PMID: 20864041) Doyle JM … Potts PR (Molecular cell 2010) 3 4 58
- Melanoma gene expression and clinical course. (PMID: 19326132) Vourc'h-Jourdain M … Dreno B (Archives of dermatological research 2009) 3 22 58
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- GeneCopoeia miRNA 3'UTR Target clone products for MAGEA3
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for MAGEA3
- Boster Bio Antibodies for MAGEA3
- Browse Boster Bio ELISA Kits
Sources for MAGEA3 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
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- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
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- (133) ENCODE
- (134) ProSci
- (135) Horizon
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- (150) Human Protein Atlas
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- (153) DataMed
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- (155) genomics-online
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- (160) Aminode
- (161) GeneCopoeia
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- (163) RNACentral
- (164) LncRNADisease
- (165) LOVD
- (166) miR2Disease
- (167) DiseaseEnhancer
- (168) Boster Bio
- (169) Biorbyt