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Aliases for MAB21L4 Gene

Aliases for MAB21L4 Gene

  • Mab-21 Like 4 2 3 5
  • Protein Mab-21-Like 4 3 4
  • C2orf54 3 4
  • Chromosome 2 Open Reading Frame 54 2
  • Uncharacterized Protein C2orf54 3

External Ids for MAB21L4 Gene

Previous HGNC Symbols for MAB21L4 Gene

  • C2orf54

Summaries for MAB21L4 Gene

GeneCards Summary for MAB21L4 Gene

MAB21L4 (Mab-21 Like 4) is a Protein Coding gene. An important paralog of this gene is MB21D2.

Additional gene information for MAB21L4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MAB21L4 Gene

Genomics for MAB21L4 Gene

GeneHancer (GH) Regulatory Elements for MAB21L4 Gene

Promoters and enhancers for MAB21L4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J240895 Promoter/Enhancer 1.6 Ensembl ENCODE dbSUPER 621.5 -0.7 -675 3.4 SP1 PPARG KLF14 SP5 ZNF644 KAT8 GLIS2 RXRA ZIC2 GATAD2A MAB21L4 AGXT CROCC2
GH02J240892 Promoter/Enhancer 0.9 EPDnew dbSUPER 618.8 +4.8 4834 0.1 ZIC2 NFIC MAB21L4 ENSG00000229996 AGXT
GH02J240896 Promoter/Enhancer 0.7 Ensembl dbSUPER 620.2 +1.8 1788 0.2 MAB21L4 AGXT
GH02J240818 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE 14.3 +76.8 76756 3.3 ZNF652 CREB1 GLIS2 ZBTB8A PRDM10 ZIC2 POLR2A PATZ1 ZNF501 ZNF341 KIF1A NDUFA10 MAB21L4 AGXT MTERF4 GC02P240756
GH02J240893 Promoter/Enhancer 1.1 Ensembl dbSUPER 20.3 +3.1 3088 1.2 RXRA ESRRA PKNOX1 NR2F1 ZFHX2 ZNF189 ELF1 MAZ ZFP91 FOS MAB21L4 AGXT
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MAB21L4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MAB21L4 Gene

Genomic Locations for MAB21L4 Gene
chr2:240,886,048-240,896,889
(GRCh38/hg38)
Size:
10,842 bases
Orientation:
Minus strand
chr2:241,825,465-241,836,306
(GRCh37/hg19)
Size:
10,842 bases
Orientation:
Minus strand

Genomic View for MAB21L4 Gene

Genes around MAB21L4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MAB21L4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MAB21L4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MAB21L4 Gene

Proteins for MAB21L4 Gene

  • Protein details for MAB21L4 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q08AI8-MB214_HUMAN
    Recommended name:
    Protein mab-21-like 4
    Protein Accession:
    Q08AI8
    Secondary Accessions:
    • B3KPP9
    • H7BXM3
    • Q08AI9
    • Q53QU5
    • Q9H622

    Protein attributes for MAB21L4 Gene

    Size:
    447 amino acids
    Molecular mass:
    49565 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for MAB21L4 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for MAB21L4 Gene

Post-translational modifications for MAB21L4 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for MAB21L4 Gene

No data available for DME Specific Peptides for MAB21L4 Gene

Domains & Families for MAB21L4 Gene

Gene Families for MAB21L4 Gene

HGNC:
Human Protein Atlas (HPA):
  • Predicted intracellular proteins

Protein Domains for MAB21L4 Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MAB21L4: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MAB21L4 Gene

Function for MAB21L4 Gene

Phenotypes From GWAS Catalog for MAB21L4 Gene

genes like me logo Genes that share phenotypes with MAB21L4: view

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials (abm): Clones for MAB21L4 - Now 50% OFF >
  • * MAB21L4 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
  • * MAB21L4 tags and reporters available: His, HA, Myc, Flag, GFP, RFP, Luciferase - Browse All

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MAB21L4 Gene

Localization for MAB21L4 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for MAB21L4 gene
Compartment Confidence
nucleus 2
golgi apparatus 2
plasma membrane 1
extracellular 1
mitochondrion 1
endoplasmic reticulum 0
cytosol 0

Subcellular locations from the

Human Protein Atlas (HPA)
  • Golgi apparatus (2)
  • Nucleoplasm (2)
See all subcellular structures

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for MAB21L4 Gene

Pathways & Interactions for MAB21L4 Gene

PathCards logo

SuperPathways for MAB21L4 Gene

No Data Available

Interacting Proteins for MAB21L4 Gene

STRING Interaction Network Preview (showing top 1 STRING interactants - click image to see details)
https://version11.string-db.org/api/image/network?species=9606&limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000373586%0d9606.ENSP00000363899%0d
Selected Interacting proteins: Q08AI8-MB214_HUMAN ENSP00000373586 for MAB21L4 Gene via IID STRING

Gene Ontology (GO) - Biological Process for MAB21L4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MAB21L4 Gene

Drugs & Compounds for MAB21L4 Gene

No Compound Related Data Available

Transcripts for MAB21L4 Gene

mRNA/cDNA for MAB21L4 Gene

(3) REFSEQ mRNAs :
(6) Additional mRNA sequences :
(1) Selected AceView cDNA sequences:
(5) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Unigene Clusters for MAB21L4 Gene

Chromosome 2 open reading frame 54:
Representative Sequences:

CRISPR Products

Clone Products

  • Applied Biological Materials (abm): Clones for MAB21L4 - Now 50% OFF >
  • * MAB21L4 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
  • * MAB21L4 tags and reporters available: His, HA, Myc, Flag, GFP, RFP, Luciferase - Browse All

Alternative Splicing Database (ASD) splice patterns (SP) for MAB21L4 Gene

No ASD Table

Relevant External Links for MAB21L4 Gene

GeneLoc Exon Structure for
MAB21L4
ECgene alternative splicing isoforms for
MAB21L4

Expression for MAB21L4 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

NURSA nuclear receptor signaling pathways regulating expression of MAB21L4 Gene:

MAB21L4

SOURCE GeneReport for Unigene cluster for MAB21L4 Gene:

Hs.193745
genes like me logo Genes that share expression patterns with MAB21L4: view

No data available for mRNA expression in normal human tissues , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MAB21L4 Gene

Orthologs for MAB21L4 Gene

This gene was present in the common ancestor of chordates.

Orthologs for MAB21L4 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C2BH2orf54 34
  • 99.4 (n)
C2orf54 35
  • 99 (a)
OneToOne
dog
(Canis familiaris)
Mammalia C25H2orf54 34
  • 85.02 (n)
-- 35
  • 80 (a)
OneToMany
-- 35
  • 79 (a)
OneToMany
cow
(Bos Taurus)
Mammalia C3H2orf54 34
  • 82.85 (n)
C2orf54 35
  • 75 (a)
OneToOne
mouse
(Mus musculus)
Mammalia 2310007B03Rik 35 34
  • 79.79 (n)
OneToOne
Mab21l4 17
rat
(Rattus norvegicus)
Mammalia RGD1563692 34
  • 78.82 (n)
platypus
(Ornithorhynchus anatinus)
Mammalia C2orf54 35
  • 65 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia C2orf54 35
  • 63 (a)
OneToOne
chicken
(Gallus gallus)
Aves C2ORF54 34
  • 62.56 (n)
C2orf54 35
  • 47 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia C2orf54 35
  • 48 (a)
OneToOne
Species where no ortholog for MAB21L4 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MAB21L4 Gene

ENSEMBL:
Gene Tree for MAB21L4 (if available)
TreeFam:
Gene Tree for MAB21L4 (if available)

Paralogs for MAB21L4 Gene

genes like me logo Genes that share paralogs with MAB21L4: view

Variants for MAB21L4 Gene

Sequence variations from dbSNP and Humsavar for MAB21L4 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000048060 -- 240,888,003(-) G/T intron_variant
rs1000161998 -- 240,887,721(-) G/C intron_variant
rs1000189270 -- 240,885,755(-) T/G downstream_transcript_variant
rs1000197132 -- 240,892,415(-) C/T genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1000277078 -- 240,886,095(-) G/A 3_prime_UTR_variant

Structural Variations from Database of Genomic Variants (DGV) for MAB21L4 Gene

Variant ID Type Subtype PubMed ID
dgv7376n54 CNV loss 21841781
esv2721955 CNV deletion 23290073
nsv460167 CNV gain 19166990
nsv460168 CNV loss 19166990
nsv470531 CNV loss 18288195
nsv519993 CNV loss 19592680
nsv584861 CNV gain 21841781
nsv584886 CNV loss 21841781
nsv955294 CNV deletion 24416366

Variation tolerance for MAB21L4 Gene

Residual Variation Intolerance Score: 83.1% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 5.20; 69.80% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for MAB21L4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MAB21L4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for MAB21L4 Gene

Disorders for MAB21L4 Gene

No disorders were found for MAB21L4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MAB21L4 Gene

Publications for MAB21L4 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 4 58
  2. Architecture of the human interactome defines protein communities and disease networks. (PMID: 28514442) Huttlin EL … Harper JW (Nature 2017) 3 58
  3. Generation and annotation of the DNA sequences of human chromosomes 2 and 4. (PMID: 15815621) Hillier LW … Wilson RK (Nature 2005) 4 58
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 4 58
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for MAB21L4 Gene

Sources for MAB21L4 Gene

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