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LZTS1-AS1 (LZTS1 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH08J020276 | Enhancer | 0.9 | ENCODE dbSUPER | 250.7 | +1.6 | 1581 | 1.5 | ZNF395 VEZF1 GABPA NFE2 IRF9 STAT5A DIDO1 ZNF589 CAVIN1 TAF7 | LZTS1-AS1 LZTS1 INTS10 RNU6-892P RNA5SP257 RF00001-321 ATP6V1B2 | |
GH08J020278 | Promoter/Enhancer | 0.7 | EPDnew dbSUPER | 250.7 | 0.0 | -34 | 0.1 | POU5F1 USF1 | LZTS1-AS1 LZTS1 RNU6-892P piR-57135-086 ATP6V1B2 | |
GH08J020273 | Enhancer | 0.6 | ENCODE dbSUPER | 250.7 | -1.8 | -1836 | 1.3 | VEZF1 GABPA EBF1 GATA2 ZNF639 | LZTS1-AS1 LZTS1 RNU6-892P piR-57135-086 ATP6V1B2 | |
GH08J020277 | Promoter/Enhancer | 0.5 | Ensembl dbSUPER | 250.7 | -0.6 | -571 | 0.4 | LZTS1-AS1 LZTS1 RNU6-892P piR-57135-086 ATP6V1B2 | ||
GH08J020274 | Enhancer | 0.3 | ENCODE dbSUPER | 250.7 | -0.8 | -847 | 0.2 | LZTS1-AS1 LZTS1 RNU6-892P piR-57135-086 ATP6V1B2 |
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0003735 | structural constituent of ribosome | IEA | -- |
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0005840 | ribosome | IEA | -- |
RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
---|---|---|---|---|
URS000048471C_9606 | lncRNA | 892 | 5 |
RefSeq: NR_047509, Ensembl: ENST00000523103 (view in UCSC) , LncBook: HSALNT0133806, LNCipedia: LZTS1-AS1:1, NONCODE: NONHSAT125394.2, |
URS00009AF5E9_9606 | lncRNA | 892 | 2 |
LncBook: HSALNT0133807, NONCODE: NONHSAT215503.1, |
URS0001BD6F0B_9606 | lncRNA | 892 | 1 |
LncBook: HSALNT0133807, |
URS0001BF43BC_9606 | lncRNA | 892 | 1 |
LncBook: HSALNT0133806, |
This gene was present in the common ancestor of mammals.
Organism | Taxonomy | Gene | Similarity | Type | Details |
---|---|---|---|---|---|
Chimpanzee (Pan troglodytes) |
Mammalia | 5S_rRNA 31 |
|
OneToOne | |
Cow (Bos Taurus) |
Mammalia | 5S_rRNA 31 |
|
ManyToMany | |
Mouse (Mus musculus) |
Mammalia | Gm23702 31 |
|
OneToOne |
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
esv3416047 | CNV | insertion | 20981092 |
esv3616566 | CNV | loss | 21293372 |
nsv1033511 | CNV | gain | 25217958 |
nsv522185 | CNV | gain | 19592680 |
No disorders were found for LZTS1-AS1 Gene.
No publications were found for LZTS1-AS1 Gene.