Aliases for LYPLA2P2 Gene

Aliases for LYPLA2P2 Gene

  • LYPLA2 Pseudogene 2 2 3 5
  • Lysophospholipase II Pseudogene 2 2 3

External Ids for LYPLA2P2 Gene

Summaries for LYPLA2P2 Gene

GeneCards Summary for LYPLA2P2 Gene

LYPLA2P2 (LYPLA2 Pseudogene 2) is a Pseudogene.

Additional gene information for LYPLA2P2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LYPLA2P2 Gene

Genomics for LYPLA2P2 Gene

GeneHancer (GH) Regulatory Elements for LYPLA2P2 Gene

Promoters and enhancers for LYPLA2P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J007879 Enhancer 0.5 Ensembl 500.7 +0.7 707 1.6 POLR2A GABPB1 E2F6 ZBTB33 ZNF580 MYC MAX NR4A1 ZFX LYPLA2P2 piR-57460-339 EVI5L
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LYPLA2P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LYPLA2P2 Gene

Genomic Locations for LYPLA2P2 Gene
chr19:7,878,619-7,880,232
(GRCh38/hg38)
Size:
1,614 bases
Orientation:
Minus strand
chr19:7,943,504-7,945,117
(GRCh37/hg19)
Size:
1,614 bases
Orientation:
Minus strand

Genomic View for LYPLA2P2 Gene

Genes around LYPLA2P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LYPLA2P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LYPLA2P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LYPLA2P2 Gene

Proteins for LYPLA2P2 Gene

Post-translational modifications for LYPLA2P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LYPLA2P2 Gene

Domains & Families for LYPLA2P2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LYPLA2P2 Gene

Function for LYPLA2P2 Gene

Phenotypes for LYPLA2P2 Gene

genes like me logo Genes that share phenotypes with LYPLA2P2: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LYPLA2P2 Gene

Localization for LYPLA2P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LYPLA2P2 Gene

Pathways & Interactions for LYPLA2P2 Gene

PathCards logo

SuperPathways for LYPLA2P2 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LYPLA2P2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LYPLA2P2 Gene

Drugs & Compounds for LYPLA2P2 Gene

No Compound Related Data Available

Transcripts for LYPLA2P2 Gene

mRNA/cDNA for LYPLA2P2 Gene

1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LYPLA2P2 Gene

No ASD Table

Relevant External Links for LYPLA2P2 Gene

GeneLoc Exon Structure for
LYPLA2P2

Expression for LYPLA2P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LYPLA2P2 Gene

genes like me logo Genes that share expression patterns with LYPLA2P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LYPLA2P2 Gene

Orthologs for LYPLA2P2 Gene

Evolution for LYPLA2P2 Gene

ENSEMBL:
Gene Tree for LYPLA2P2 (if available)
TreeFam:
Gene Tree for LYPLA2P2 (if available)

No data available for Orthologs for LYPLA2P2 Gene

Paralogs for LYPLA2P2 Gene

No data available for Paralogs for LYPLA2P2 Gene

Variants for LYPLA2P2 Gene

Structural Variations from Database of Genomic Variants (DGV) for LYPLA2P2 Gene

Variant ID Type Subtype PubMed ID
nsv833733 CNV gain 17160897
nsv960782 CNV duplication 23825009

Additional Variant Information for LYPLA2P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LYPLA2P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) and Variation tolerance for LYPLA2P2 Gene

Disorders for LYPLA2P2 Gene

Additional Disease Information for LYPLA2P2

No disorders were found for LYPLA2P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LYPLA2P2 Gene

Publications for LYPLA2P2 Gene

  1. Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. (PMID: 15146197) Brandenberger R … Stanton LW (Nature biotechnology 2004) 3 54
  2. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 54

Products for LYPLA2P2 Gene

Sources for LYPLA2P2 Gene